List of
Imperfect Penta
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884671 | AATAG | 3 | 984 | 997 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 2. | NW_001884671 | TTTTC | 3 | 3401 | 3415 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 317148690 |
| 3. | NW_001884671 | TCTTT | 4 | 25870 | 25889 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 4. | NW_001884671 | GCCGC | 3 | 44011 | 44025 | 15 | 0.00% | 0.00% | 40.00% | 60.00% | 317148708 |
| 5. | NW_001884671 | GGAGG | 3 | 54595 | 54609 | 15 | 20.00% | 0.00% | 80.00% | 0.00% | 317148712 |
| 6. | NW_001884671 | AGCGG | 3 | 64768 | 64782 | 15 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 7. | NW_001884671 | ATATT | 3 | 81307 | 81321 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001884671 | TCCTG | 3 | 118525 | 118540 | 16 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 9. | NW_001884671 | ATATA | 5 | 122717 | 122740 | 24 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001884671 | AAAAT | 4 | 123192 | 123211 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001884671 | TCTCC | 3 | 125117 | 125131 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 12. | NW_001884671 | CTTTG | 3 | 149912 | 149926 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 317148615 |
| 13. | NW_001884671 | CAATG | 3 | 157190 | 157204 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 14. | NW_001884671 | CTAAT | 3 | 164441 | 164455 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 15. | NW_001884671 | CTCAG | 4 | 180447 | 180466 | 20 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 16. | NW_001884671 | GAAGT | 3 | 185879 | 185894 | 16 | 40.00% | 20.00% | 40.00% | 0.00% | 169776764 |
| 17. | NW_001884671 | CGCTA | 3 | 200533 | 200547 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 18. | NW_001884671 | GAAAA | 7 | 203685 | 203719 | 35 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 19. | NW_001884671 | TCTTT | 11 | 229091 | 229144 | 54 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 20. | NW_001884671 | AGCCA | 3 | 251184 | 251197 | 14 | 40.00% | 0.00% | 20.00% | 40.00% | 317148655 |
| 21. | NW_001884671 | GCCAA | 3 | 256246 | 256260 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 22. | NW_001884671 | ATTCC | 3 | 258569 | 258584 | 16 | 20.00% | 40.00% | 0.00% | 40.00% | 317148661 |
| 23. | NW_001884671 | ACTCT | 3 | 321705 | 321719 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 24. | NW_001884671 | GAACC | 3 | 324447 | 324462 | 16 | 40.00% | 0.00% | 20.00% | 40.00% | 317148752 |
| 25. | NW_001884671 | ACCCG | 3 | 337817 | 337831 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |