List of
Perfect Penta
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884668 | AAAAT | 3 | 219402 | 219416 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001884668 | TTATA | 3 | 253731 | 253745 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001884668 | TCTTT | 4 | 427557 | 427576 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 4. | NW_001884668 | CTTTT | 3 | 462325 | 462339 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 5. | NW_001884668 | AAAGA | 3 | 569237 | 569251 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 6. | NW_001884668 | TTATT | 3 | 571891 | 571905 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001884668 | ATAAA | 3 | 582462 | 582476 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001884668 | CTTTT | 3 | 802721 | 802735 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 9. | NW_001884668 | TCTTT | 3 | 802885 | 802899 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 10. | NW_001884668 | AAAAG | 4 | 808905 | 808924 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 11. | NW_001884668 | CTTTT | 3 | 817876 | 817890 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 12. | NW_001884668 | AGAAA | 4 | 819598 | 819617 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 13. | NW_001884668 | ATTTT | 3 | 899065 | 899079 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 317146967 |
| 14. | NW_001884668 | CCCCT | 3 | 936044 | 936058 | 15 | 0.00% | 20.00% | 0.00% | 80.00% | Non-Coding |
| 15. | NW_001884668 | TCTTT | 3 | 993812 | 993826 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 16. | NW_001884668 | CTTCT | 3 | 1031358 | 1031372 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 17. | NW_001884668 | AGAAA | 3 | 1033948 | 1033962 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 18. | NW_001884668 | GAAAA | 3 | 1055742 | 1055756 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 19. | NW_001884668 | ACATG | 3 | 1068786 | 1068800 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 20. | NW_001884668 | TTTCT | 3 | 1127873 | 1127887 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 21. | NW_001884668 | TATTT | 3 | 1137040 | 1137054 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001884668 | TATTT | 4 | 1138750 | 1138769 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 23. | NW_001884668 | GAAAA | 3 | 1179808 | 1179822 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 317147083 |
| 24. | NW_001884668 | TTTCT | 3 | 1204315 | 1204329 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 25. | NW_001884668 | TGAAT | 3 | 1305744 | 1305758 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 26. | NW_001884668 | AAAAG | 3 | 1310097 | 1310111 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 27. | NW_001884668 | ATAAA | 3 | 1325080 | 1325094 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 28. | NW_001884668 | GAAAT | 3 | 1332727 | 1332741 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 29. | NW_001884668 | TTTCT | 4 | 1350317 | 1350336 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 30. | NW_001884668 | AATAT | 3 | 1473712 | 1473726 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001884668 | CACGG | 3 | 1473753 | 1473767 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 32. | NW_001884668 | AAATA | 3 | 1500033 | 1500047 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001884668 | TCAGC | 3 | 1640402 | 1640416 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 34. | NW_001884668 | CTTTC | 10 | 1645361 | 1645410 | 50 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 35. | NW_001884668 | CTTTT | 5 | 1645411 | 1645435 | 25 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 36. | NW_001884668 | AAAGA | 3 | 1652064 | 1652078 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 37. | NW_001884668 | AAAGA | 4 | 1653042 | 1653061 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 38. | NW_001884668 | AAAGA | 3 | 1669442 | 1669456 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 39. | NW_001884668 | CCGTA | 3 | 1716894 | 1716908 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 40. | NW_001884668 | TAAAC | 3 | 1768365 | 1768379 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | 169775193 |
| 41. | NW_001884668 | TCAAA | 3 | 1782240 | 1782254 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 42. | NW_001884668 | ATAGG | 3 | 1797050 | 1797064 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 43. | NW_001884668 | TTTAT | 6 | 1798429 | 1798458 | 30 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001884668 | AAATA | 3 | 1798627 | 1798641 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 45. | NW_001884668 | TTCTT | 3 | 1819851 | 1819865 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 317147356 |
| 46. | NW_001884668 | TTTCT | 4 | 1825097 | 1825116 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | 317147356 |
| 47. | NW_001884668 | TTTCT | 3 | 1826844 | 1826858 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 317147356 |
| 48. | NW_001884668 | CGCCT | 3 | 1904561 | 1904575 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | Non-Coding |
| 49. | NW_001884668 | TATTT | 3 | 1934918 | 1934932 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001884668 | TTATA | 3 | 1941753 | 1941767 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001884668 | AGAAA | 4 | 1961823 | 1961842 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 52. | NW_001884668 | TGATT | 3 | 1981690 | 1981704 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 53. | NW_001884668 | TTTCT | 4 | 1991518 | 1991537 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 54. | NW_001884668 | AAAGA | 3 | 1996115 | 1996129 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 55. | NW_001884668 | GTCTT | 3 | 2033638 | 2033652 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 317147460 |
| 56. | NW_001884668 | ATTCA | 3 | 2079592 | 2079606 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 57. | NW_001884668 | GAAAA | 5 | 2124073 | 2124097 | 25 | 80.00% | 0.00% | 20.00% | 0.00% | 317147513 |
| 58. | NW_001884668 | ATTTT | 3 | 2158833 | 2158847 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001884668 | TCTTT | 6 | 2170679 | 2170708 | 30 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |