List of
Perfect Penta
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001884660 | AGGTT | 3 | 35179 | 35193 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 2. | NW_001884660 | GTATG | 3 | 41989 | 42003 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 3. | NW_001884660 | TCCTC | 3 | 240983 | 240997 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | 317138006 |
| 4. | NW_001884660 | GAAAA | 3 | 346804 | 346818 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 5. | NW_001884660 | GATGC | 3 | 371786 | 371800 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 6. | NW_001884660 | AAGAA | 3 | 388463 | 388477 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 7. | NW_001884660 | CCTAA | 4 | 444405 | 444424 | 20 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 8. | NW_001884660 | AAAAC | 3 | 446812 | 446826 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 9. | NW_001884660 | AAGAA | 3 | 456609 | 456623 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 10. | NW_001884660 | CTTTC | 3 | 459409 | 459423 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 11. | NW_001884660 | CATCT | 6 | 505970 | 505999 | 30 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 12. | NW_001884660 | TTTTC | 3 | 555653 | 555667 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 13. | NW_001884660 | AACTA | 3 | 560404 | 560418 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 14. | NW_001884660 | AAAAG | 3 | 588532 | 588546 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 15. | NW_001884660 | CTTTT | 4 | 659967 | 659986 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | 169764527 |
| 16. | NW_001884660 | GAATG | 3 | 683133 | 683147 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 17. | NW_001884660 | AGAAA | 4 | 712259 | 712278 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | 317138211 |
| 18. | NW_001884660 | ATAAA | 3 | 726091 | 726105 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001884660 | TTTTA | 3 | 781034 | 781048 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001884660 | CTTTC | 3 | 820344 | 820358 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 21. | NW_001884660 | AATCC | 3 | 922301 | 922315 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 22. | NW_001884660 | TCTTT | 3 | 922411 | 922425 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 23. | NW_001884660 | TTTTC | 3 | 937569 | 937583 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 24. | NW_001884660 | AAACA | 3 | 976478 | 976492 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 25. | NW_001884660 | TCTTT | 4 | 1039827 | 1039846 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 26. | NW_001884660 | AAAAT | 5 | 1041773 | 1041797 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | 317138371 |
| 27. | NW_001884660 | TCTTT | 3 | 1257448 | 1257462 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 28. | NW_001884660 | GCTGA | 3 | 1296329 | 1296343 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 29. | NW_001884660 | TTCTT | 3 | 1311865 | 1311879 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 30. | NW_001884660 | TATTT | 4 | 1326976 | 1326995 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001884660 | GCGTG | 3 | 1332799 | 1332813 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 32. | NW_001884660 | TTATT | 3 | 1364929 | 1364943 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001884660 | AAGAA | 3 | 1365107 | 1365121 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 34. | NW_001884660 | TCTTT | 3 | 1366602 | 1366616 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 35. | NW_001884660 | AAAAT | 3 | 1375740 | 1375754 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 317138514 |
| 36. | NW_001884660 | GACGG | 5 | 1397359 | 1397383 | 25 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 37. | NW_001884660 | AAGAT | 3 | 1508507 | 1508521 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 38. | NW_001884660 | GTCCT | 3 | 1640628 | 1640642 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 39. | NW_001884660 | CCCTC | 3 | 1647371 | 1647385 | 15 | 0.00% | 20.00% | 0.00% | 80.00% | 317138638 |
| 40. | NW_001884660 | AAAAT | 3 | 1717887 | 1717901 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001884660 | TCTTT | 3 | 1753579 | 1753593 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 42. | NW_001884660 | TCTTT | 9 | 1788086 | 1788130 | 45 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 43. | NW_001884660 | TTTCC | 3 | 1908550 | 1908564 | 15 | 0.00% | 60.00% | 0.00% | 40.00% | 317138778 |