List of
Perfect Hexa
-nucleotide repeats in Aspergillus oryzae RIB40
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001849580 | TATTAA | 3 | 8942 | 8959 | 18 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001849580 | TTAATT | 3 | 339771 | 339788 | 18 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001849580 | GGCGGA | 3 | 369688 | 369705 | 18 | 16.67% | 0.00% | 66.67% | 16.67% | 169762626 |
| 4. | NW_001849580 | GAAAAA | 4 | 415936 | 415959 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 5. | NW_001849580 | TTTCTT | 6 | 456512 | 456547 | 36 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 6. | NW_001849580 | TTTCTT | 3 | 566006 | 566023 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 7. | NW_001849580 | TTTCAT | 3 | 579947 | 579964 | 18 | 16.67% | 66.67% | 0.00% | 16.67% | Non-Coding |
| 8. | NW_001849580 | TGGGTT | 3 | 587071 | 587088 | 18 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 9. | NW_001849580 | ACAGAA | 3 | 621170 | 621187 | 18 | 66.67% | 0.00% | 16.67% | 16.67% | Non-Coding |
| 10. | NW_001849580 | CAGAAG | 3 | 649875 | 649892 | 18 | 50.00% | 0.00% | 33.33% | 16.67% | 317136818 |
| 11. | NW_001849580 | TCATTC | 3 | 678596 | 678613 | 18 | 16.67% | 50.00% | 0.00% | 33.33% | 169762836 |
| 12. | NW_001849580 | TTTTCT | 3 | 699847 | 699864 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 13. | NW_001849580 | AGAAAA | 4 | 1047177 | 1047200 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 14. | NW_001849580 | AAGAAA | 3 | 1066974 | 1066991 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 15. | NW_001849580 | CATGGA | 3 | 1119694 | 1119711 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 317137036 |
| 16. | NW_001849580 | TTTCTT | 3 | 1254846 | 1254863 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 17. | NW_001849580 | AATTAA | 3 | 1256001 | 1256018 | 18 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001849580 | GATGAC | 3 | 1281780 | 1281797 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 317137119 |
| 19. | NW_001849580 | TCCCTC | 3 | 1296922 | 1296939 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 317137127 |
| 20. | NW_001849580 | TCTGCA | 3 | 1400803 | 1400820 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 317137183 |
| 21. | NW_001849580 | GAGAGC | 3 | 1469867 | 1469884 | 18 | 33.33% | 0.00% | 50.00% | 16.67% | Non-Coding |
| 22. | NW_001849580 | TTCGCC | 3 | 1487679 | 1487696 | 18 | 0.00% | 33.33% | 16.67% | 50.00% | Non-Coding |
| 23. | NW_001849580 | AGAAAA | 4 | 1495127 | 1495150 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 24. | NW_001849580 | GAAAAA | 4 | 1520793 | 1520816 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 25. | NW_001849580 | TATTTT | 3 | 1523160 | 1523177 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 26. | NW_001849580 | GCAACA | 4 | 1549889 | 1549912 | 24 | 50.00% | 0.00% | 16.67% | 33.33% | 317137876 |
| 27. | NW_001849580 | GAAAAA | 3 | 1650713 | 1650730 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 28. | NW_001849580 | CTATCG | 4 | 1656855 | 1656878 | 24 | 16.67% | 33.33% | 16.67% | 33.33% | Non-Coding |
| 29. | NW_001849580 | ACCATC | 3 | 1659582 | 1659599 | 18 | 33.33% | 16.67% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001849580 | TGGCTA | 3 | 1875597 | 1875614 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | Non-Coding |
| 31. | NW_001849580 | AGGGGG | 3 | 1894942 | 1894959 | 18 | 16.67% | 0.00% | 83.33% | 0.00% | Non-Coding |
| 32. | NW_001849580 | GAAAAA | 3 | 1955940 | 1955957 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 33. | NW_001849580 | ATTTTT | 3 | 1961510 | 1961527 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001849580 | TCTCTT | 3 | 1961745 | 1961762 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001849580 | TGAATG | 3 | 2143334 | 2143351 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001849580 | ACACCA | 4 | 2260649 | 2260672 | 24 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 37. | NW_001849580 | TTATTT | 3 | 2273850 | 2273867 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001849580 | AAGGGA | 3 | 2353291 | 2353308 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 169763898 |
| 39. | NW_001849580 | AAAATA | 3 | 2384981 | 2384998 | 18 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001849580 | AGAAAA | 3 | 2501669 | 2501686 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 41. | NW_001849580 | CGTGGC | 3 | 2544453 | 2544470 | 18 | 0.00% | 16.67% | 50.00% | 33.33% | 169764034 |
| 42. | NW_001849580 | AGAAAA | 4 | 2582207 | 2582230 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 43. | NW_001849580 | CGCCTC | 3 | 2593945 | 2593962 | 18 | 0.00% | 16.67% | 16.67% | 66.67% | 169764064 |
| 44. | NW_001849580 | TTTCTT | 3 | 2595152 | 2595169 | 18 | 0.00% | 83.33% | 0.00% | 16.67% | Non-Coding |
| 45. | NW_001849580 | AGAAGG | 3 | 2607335 | 2607352 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |