List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092748 | GATT | 3 | 491 | 503 | 13 | 25.00% | 50.00% | 25.00% | 0.00% | 85117353 |
| 2. | NW_001092748 | GGAT | 3 | 701 | 712 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85117353 |
| 3. | NW_001092748 | CTTG | 3 | 3269 | 3280 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 4. | NW_001092748 | TGGA | 3 | 3572 | 3582 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 5. | NW_001092748 | GCCC | 3 | 3915 | 3926 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 6. | NW_001092748 | TCCG | 3 | 4806 | 4817 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 7. | NW_001092748 | CCGC | 3 | 10038 | 10050 | 13 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 8. | NW_001092748 | TAGG | 5 | 10218 | 10237 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | 85117361 |
| 9. | NW_001092748 | CATA | 3 | 11818 | 11828 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092748 | ATGC | 3 | 27481 | 27491 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 11. | NW_001092748 | GCGG | 4 | 29529 | 29544 | 16 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 12. | NW_001092748 | CATG | 3 | 30956 | 30966 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85117380 |
| 13. | NW_001092748 | CGTA | 3 | 32225 | 32236 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 14. | NW_001092748 | CCAT | 3 | 32389 | 32399 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85117384 |
| 15. | NW_001092748 | CAGA | 3 | 33119 | 33130 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | 85117384 |
| 16. | NW_001092748 | CTGG | 3 | 33975 | 33987 | 13 | 0.00% | 25.00% | 50.00% | 25.00% | 85117384 |
| 17. | NW_001092748 | GATC | 3 | 42275 | 42286 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85117392 |
| 18. | NW_001092748 | CCGT | 3 | 43615 | 43626 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 19. | NW_001092748 | GACT | 3 | 44241 | 44253 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | 85117396 |
| 20. | NW_001092748 | AGCA | 5 | 51714 | 51733 | 20 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092748 | AACG | 3 | 51974 | 51984 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 22. | NW_001092748 | GGAT | 3 | 52481 | 52492 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 23. | NW_001092748 | GGTG | 3 | 56624 | 56636 | 13 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 24. | NW_001092748 | AGCG | 3 | 58514 | 58524 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 25. | NW_001092748 | CGAC | 3 | 59425 | 59435 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85117416 |
| 26. | NW_001092748 | CCAG | 3 | 61057 | 61067 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85117416 |
| 27. | NW_001092748 | CAAC | 6 | 63822 | 63845 | 24 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 28. | NW_001092748 | AGGG | 3 | 64500 | 64512 | 13 | 25.00% | 0.00% | 75.00% | 0.00% | 85117420 |
| 29. | NW_001092748 | GAAT | 3 | 64766 | 64777 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 30. | NW_001092748 | CAAA | 3 | 68166 | 68176 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 31. | NW_001092748 | GGCG | 3 | 72063 | 72074 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | 85117436 |
| 32. | NW_001092748 | CCGA | 3 | 75240 | 75250 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 33. | NW_001092748 | CATC | 3 | 76089 | 76099 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85117444 |
| 34. | NW_001092748 | ACCT | 3 | 82106 | 82117 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092748 | CCAA | 3 | 82669 | 82680 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 36. | NW_001092748 | ACGA | 3 | 90637 | 90648 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 37. | NW_001092748 | TCCA | 3 | 91897 | 91907 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 38. | NW_001092748 | CTTT | 6 | 92536 | 92559 | 24 | 0.00% | 75.00% | 0.00% | 25.00% | 85117456 |
| 39. | NW_001092748 | AACA | 3 | 102081 | 102091 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 40. | NW_001092748 | GTGA | 3 | 103798 | 103809 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 41. | NW_001092748 | CCAA | 3 | 105639 | 105650 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 42. | NW_001092748 | CATC | 3 | 106902 | 106912 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 43. | NW_001092748 | AGAT | 3 | 109420 | 109430 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 44. | NW_001092748 | AAGT | 3 | 110808 | 110819 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85117480 |
| 45. | NW_001092748 | TTTC | 3 | 114763 | 114773 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 46. | NW_001092748 | TCAT | 3 | 115169 | 115180 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 47. | NW_001092748 | TACT | 3 | 120526 | 120537 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 48. | NW_001092748 | GCCC | 3 | 122430 | 122441 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 49. | NW_001092748 | GGCT | 3 | 123327 | 123337 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85117491 |
| 50. | NW_001092748 | CGAG | 3 | 127689 | 127701 | 13 | 25.00% | 0.00% | 50.00% | 25.00% | 85117500 |
| 51. | NW_001092748 | CGTC | 3 | 133609 | 133619 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85117508 |
| 52. | NW_001092748 | GACC | 3 | 138757 | 138769 | 13 | 25.00% | 0.00% | 25.00% | 50.00% | 85117512 |
| 53. | NW_001092748 | TGAT | 3 | 142124 | 142135 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 54. | NW_001092748 | TATC | 3 | 150548 | 150559 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 55. | NW_001092748 | GTCC | 3 | 152105 | 152115 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 56. | NW_001092748 | GGCC | 3 | 154399 | 154409 | 11 | 0.00% | 0.00% | 50.00% | 50.00% | 85117528 |
| 57. | NW_001092748 | AGCG | 3 | 155275 | 155285 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85117528 |
| 58. | NW_001092748 | AAGG | 3 | 160998 | 161008 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 59. | NW_001092748 | ACCA | 3 | 161856 | 161867 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 60. | NW_001092748 | CCGA | 3 | 162069 | 162080 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 61. | NW_001092748 | CGAC | 3 | 162148 | 162159 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 62. | NW_001092748 | GGAT | 5 | 162562 | 162581 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 63. | NW_001092748 | CTAT | 3 | 162698 | 162709 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 64. | NW_001092748 | AGAA | 4 | 163301 | 163317 | 17 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 65. | NW_001092748 | CTCC | 3 | 164041 | 164051 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 66. | NW_001092748 | AGCG | 3 | 167125 | 167135 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85117533 |
| 67. | NW_001092748 | AAGC | 3 | 167638 | 167650 | 13 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 68. | NW_001092748 | TGCT | 3 | 174166 | 174176 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 69. | NW_001092748 | GCTT | 3 | 176387 | 176397 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85117541 |
| 70. | NW_001092748 | CTTG | 3 | 177453 | 177464 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 71. | NW_001092748 | CCAC | 3 | 178023 | 178035 | 13 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 72. | NW_001092748 | GTGG | 3 | 178165 | 178176 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 73. | NW_001092748 | CCAT | 3 | 178568 | 178580 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 74. | NW_001092748 | AATC | 3 | 181670 | 181681 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 75. | NW_001092748 | AAAT | 3 | 183058 | 183068 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 76. | NW_001092748 | AAAT | 5 | 184818 | 184837 | 20 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 77. | NW_001092748 | CTAA | 3 | 185853 | 185864 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 78. | NW_001092748 | GGAA | 3 | 185883 | 185893 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |