List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092745 | GGC | 4 | 2244 | 2255 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 2. | NW_001092745 | GCG | 4 | 2558 | 2569 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 3. | NW_001092745 | TAG | 5 | 6616 | 6629 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092745 | AGT | 4 | 8768 | 8778 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092745 | CTT | 4 | 8868 | 8879 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001092745 | CTT | 7 | 9510 | 9530 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092745 | GAG | 4 | 9710 | 9721 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 8. | NW_001092745 | CTG | 4 | 13229 | 13239 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85116710 |
| 9. | NW_001092745 | GAG | 4 | 16610 | 16621 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116714 |
| 10. | NW_001092745 | GGA | 5 | 16627 | 16641 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85116714 |
| 11. | NW_001092745 | ATC | 5 | 17543 | 17557 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092745 | TCT | 4 | 18830 | 18841 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116718 |
| 13. | NW_001092745 | TCC | 4 | 19197 | 19207 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85116718 |
| 14. | NW_001092745 | CTG | 4 | 19940 | 19953 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | 85116718 |
| 15. | NW_001092745 | CGT | 4 | 20048 | 20059 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116718 |
| 16. | NW_001092745 | CTT | 4 | 20106 | 20117 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116718 |
| 17. | NW_001092745 | GGC | 4 | 20265 | 20276 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116718 |
| 18. | NW_001092745 | CTT | 4 | 20316 | 20327 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116718 |
| 19. | NW_001092745 | ACG | 4 | 21599 | 21611 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 20. | NW_001092745 | CAG | 4 | 21783 | 21794 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 21. | NW_001092745 | TCT | 4 | 23065 | 23075 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85116722 |
| 22. | NW_001092745 | CCA | 4 | 24707 | 24718 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 23. | NW_001092745 | CCA | 4 | 27028 | 27039 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85116727 |
| 24. | NW_001092745 | CTG | 4 | 28262 | 28274 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | 85116727 |
| 25. | NW_001092745 | GCC | 7 | 31102 | 31122 | 21 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 26. | NW_001092745 | TGT | 4 | 34569 | 34580 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092745 | CAA | 4 | 34688 | 34699 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092745 | ACC | 4 | 34921 | 34931 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85116735 |
| 29. | NW_001092745 | AGG | 4 | 35635 | 35645 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 30. | NW_001092745 | GCA | 5 | 36739 | 36753 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 31. | NW_001092745 | TGG | 4 | 38190 | 38201 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 32. | NW_001092745 | CTT | 4 | 38639 | 38650 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116739 |
| 33. | NW_001092745 | ACT | 4 | 40125 | 40135 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092745 | CAT | 5 | 41888 | 41902 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092745 | TCT | 4 | 43726 | 43736 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 36. | NW_001092745 | CAA | 4 | 45580 | 45591 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116744 |
| 37. | NW_001092745 | TGT | 11 | 47566 | 47598 | 33 | 0.00% | 66.67% | 33.33% | 0.00% | 85116748 |
| 38. | NW_001092745 | CAG | 5 | 47608 | 47622 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85116748 |
| 39. | NW_001092745 | CAG | 5 | 47704 | 47718 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85116748 |
| 40. | NW_001092745 | CGT | 4 | 47723 | 47734 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116748 |
| 41. | NW_001092745 | GAG | 4 | 48127 | 48137 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85116748 |
| 42. | NW_001092745 | GTT | 4 | 50904 | 50915 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 43. | NW_001092745 | GTT | 4 | 53646 | 53657 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001092745 | GTG | 4 | 55412 | 55423 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85116758 |
| 45. | NW_001092745 | CCT | 4 | 58223 | 58234 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85116762 |
| 46. | NW_001092745 | CGT | 4 | 58796 | 58807 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116762 |
| 47. | NW_001092745 | GAC | 4 | 59834 | 59844 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85116766 |
| 48. | NW_001092745 | ACG | 4 | 59975 | 59986 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85116766 |
| 49. | NW_001092745 | AGG | 4 | 60086 | 60097 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116766 |
| 50. | NW_001092745 | AGA | 9 | 60434 | 60460 | 27 | 66.67% | 0.00% | 33.33% | 0.00% | 85116766 |
| 51. | NW_001092745 | GAT | 5 | 61255 | 61269 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85116766 |
| 52. | NW_001092745 | GAT | 4 | 61303 | 61314 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85116766 |
| 53. | NW_001092745 | GAA | 5 | 63821 | 63835 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 54. | NW_001092745 | TTC | 4 | 65173 | 65185 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 55. | NW_001092745 | TCT | 4 | 66953 | 66963 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 56. | NW_001092745 | AGG | 4 | 68521 | 68532 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116774 |
| 57. | NW_001092745 | ACA | 4 | 68561 | 68572 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116774 |
| 58. | NW_001092745 | GGA | 5 | 68749 | 68763 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85116774 |
| 59. | NW_001092745 | CGG | 4 | 69664 | 69675 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 60. | NW_001092745 | GCG | 4 | 73421 | 73433 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85116778 |
| 61. | NW_001092745 | GCA | 11 | 73692 | 73722 | 31 | 33.33% | 0.00% | 33.33% | 33.33% | 85116778 |
| 62. | NW_001092745 | AGG | 4 | 73785 | 73796 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116778 |
| 63. | NW_001092745 | GCG | 5 | 73817 | 73831 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85116778 |
| 64. | NW_001092745 | CAG | 5 | 73891 | 73905 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85116778 |
| 65. | NW_001092745 | TGA | 4 | 74104 | 74114 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 66. | NW_001092745 | ACT | 4 | 74380 | 74391 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 67. | NW_001092745 | GTT | 4 | 78426 | 78437 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 68. | NW_001092745 | CTT | 4 | 79605 | 79615 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85116791 |
| 69. | NW_001092745 | CGG | 7 | 84853 | 84873 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | 85116795 |
| 70. | NW_001092745 | GCG | 5 | 84885 | 84899 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85116795 |
| 71. | NW_001092745 | GGC | 4 | 84926 | 84937 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116795 |
| 72. | NW_001092745 | GGC | 4 | 84962 | 84973 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116795 |
| 73. | NW_001092745 | GGT | 4 | 84998 | 85009 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85116795 |
| 74. | NW_001092745 | GGA | 4 | 85799 | 85810 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 75. | NW_001092745 | TGG | 4 | 85944 | 85955 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85116799 |
| 76. | NW_001092745 | GCG | 4 | 87106 | 87117 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 77. | NW_001092745 | ACC | 4 | 89299 | 89310 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85116804 |
| 78. | NW_001092745 | CCA | 4 | 95777 | 95787 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 79. | NW_001092745 | ATA | 4 | 100469 | 100479 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 80. | NW_001092745 | CAA | 4 | 102493 | 102504 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116812 |
| 81. | NW_001092745 | CAG | 5 | 102748 | 102761 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | 85116812 |
| 82. | NW_001092745 | CGT | 4 | 105951 | 105962 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116820 |
| 83. | NW_001092745 | CGA | 4 | 106045 | 106055 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85116820 |
| 84. | NW_001092745 | CAA | 4 | 109490 | 109501 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116820 |
| 85. | NW_001092745 | CAG | 5 | 109499 | 109513 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85116820 |
| 86. | NW_001092745 | AGG | 4 | 109584 | 109595 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116820 |
| 87. | NW_001092745 | TCC | 4 | 114291 | 114302 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 88. | NW_001092745 | AGG | 5 | 115561 | 115575 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85116833 |
| 89. | NW_001092745 | CTT | 4 | 115858 | 115869 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116833 |
| 90. | NW_001092745 | GTG | 4 | 117521 | 117531 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 91. | NW_001092745 | TGC | 4 | 120123 | 120134 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116837 |
| 92. | NW_001092745 | GAC | 4 | 120425 | 120435 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85116837 |
| 93. | NW_001092745 | TAC | 4 | 121042 | 121053 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 94. | NW_001092745 | TGA | 4 | 122725 | 122736 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 95. | NW_001092745 | GAG | 4 | 122741 | 122755 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 96. | NW_001092745 | TTC | 4 | 123267 | 123278 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 97. | NW_001092745 | GTC | 4 | 123418 | 123429 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116841 |
| 98. | NW_001092745 | GAG | 8 | 123585 | 123608 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | 85116841 |
| 99. | NW_001092745 | CGT | 4 | 123648 | 123659 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116841 |
| 100. | NW_001092745 | ACC | 4 | 123667 | 123678 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85116841 |
| 101. | NW_001092745 | TTG | 4 | 123750 | 123762 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | 85116841 |
| 102. | NW_001092745 | GTG | 4 | 123762 | 123776 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85116841 |
| 103. | NW_001092745 | CTT | 4 | 124228 | 124239 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116841 |
| 104. | NW_001092745 | CGG | 4 | 125794 | 125805 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116841 |
| 105. | NW_001092745 | CAT | 4 | 126034 | 126045 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85116841 |
| 106. | NW_001092745 | CGT | 4 | 126327 | 126338 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116841 |
| 107. | NW_001092745 | TCT | 4 | 126501 | 126512 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116841 |
| 108. | NW_001092745 | CGT | 4 | 127008 | 127018 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85116841 |
| 109. | NW_001092745 | TGT | 15 | 127075 | 127119 | 45 | 0.00% | 66.67% | 33.33% | 0.00% | 85116841 |
| 110. | NW_001092745 | CAC | 4 | 129114 | 129125 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85116845 |
| 111. | NW_001092745 | TCT | 4 | 129243 | 129254 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116845 |
| 112. | NW_001092745 | GAG | 4 | 133399 | 133410 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116849 |
| 113. | NW_001092745 | ATT | 4 | 134509 | 134520 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 114. | NW_001092745 | CTG | 4 | 136024 | 136035 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116853 |
| 115. | NW_001092745 | CTT | 5 | 137790 | 137804 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85116853 |
| 116. | NW_001092745 | GTG | 8 | 139525 | 139548 | 24 | 0.00% | 33.33% | 66.67% | 0.00% | 85116853 |
| 117. | NW_001092745 | GGA | 4 | 140201 | 140212 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 118. | NW_001092745 | TCG | 4 | 140871 | 140882 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 119. | NW_001092745 | GTT | 4 | 143870 | 143881 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 120. | NW_001092745 | TGG | 4 | 144757 | 144768 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |