List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092742 | AGA | 4 | 1570 | 1581 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85116110 |
| 2. | NW_001092742 | TGG | 4 | 1978 | 1989 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 3. | NW_001092742 | ATA | 4 | 2278 | 2290 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092742 | CCG | 4 | 2771 | 2783 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85116114 |
| 5. | NW_001092742 | GCA | 4 | 3862 | 3873 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85116114 |
| 6. | NW_001092742 | GGC | 4 | 6020 | 6031 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116118 |
| 7. | NW_001092742 | TCT | 9 | 6920 | 6946 | 27 | 0.00% | 66.67% | 0.00% | 33.33% | 85116118 |
| 8. | NW_001092742 | CTC | 8 | 6994 | 7017 | 24 | 0.00% | 33.33% | 0.00% | 66.67% | 85116118 |
| 9. | NW_001092742 | TGG | 4 | 8297 | 8308 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85116118 |
| 10. | NW_001092742 | GCT | 4 | 8323 | 8334 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116118 |
| 11. | NW_001092742 | CCT | 4 | 10500 | 10512 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 12. | NW_001092742 | ATC | 4 | 11101 | 11112 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85116122 |
| 13. | NW_001092742 | TGA | 4 | 12863 | 12873 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 14. | NW_001092742 | ATC | 4 | 14318 | 14330 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001092742 | CGC | 4 | 15643 | 15654 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85116125 |
| 16. | NW_001092742 | CAA | 4 | 17141 | 17152 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116125 |
| 17. | NW_001092742 | GTT | 4 | 22475 | 22486 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092742 | TCT | 4 | 23604 | 23615 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85116134 |
| 19. | NW_001092742 | TAG | 4 | 25720 | 25730 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85116134 |
| 20. | NW_001092742 | CTT | 4 | 27489 | 27500 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092742 | CTT | 4 | 27682 | 27694 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 22. | NW_001092742 | GGA | 4 | 27777 | 27787 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092742 | TGA | 4 | 28084 | 28096 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | 85116139 |
| 24. | NW_001092742 | CTC | 4 | 31669 | 31681 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 85116147 |
| 25. | NW_001092742 | TGA | 4 | 33280 | 33291 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092742 | GTT | 4 | 34815 | 34826 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092742 | CAG | 5 | 36913 | 36927 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 28. | NW_001092742 | AAG | 4 | 38103 | 38114 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85116155 |
| 29. | NW_001092742 | CCT | 4 | 38730 | 38741 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85116161 |
| 30. | NW_001092742 | TTC | 5 | 39403 | 39417 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85116161 |
| 31. | NW_001092742 | GCT | 4 | 43777 | 43788 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116169 |
| 32. | NW_001092742 | GCA | 4 | 47355 | 47366 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85116177 |
| 33. | NW_001092742 | ACA | 4 | 47592 | 47603 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116177 |
| 34. | NW_001092742 | AAC | 4 | 50474 | 50485 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116181 |
| 35. | NW_001092742 | CAC | 4 | 54086 | 54096 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 36. | NW_001092742 | CGA | 4 | 56225 | 56236 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092742 | ACA | 4 | 58785 | 58795 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092742 | CTC | 4 | 62696 | 62706 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85116193 |
| 39. | NW_001092742 | ATG | 4 | 63200 | 63211 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85116193 |
| 40. | NW_001092742 | GGA | 4 | 63840 | 63850 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85116193 |
| 41. | NW_001092742 | CCT | 4 | 66935 | 66946 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 42. | NW_001092742 | CTG | 4 | 67085 | 67095 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 43. | NW_001092742 | AGA | 4 | 67842 | 67853 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001092742 | CTA | 5 | 68353 | 68368 | 16 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 45. | NW_001092742 | TAG | 4 | 68377 | 68387 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 46. | NW_001092742 | CGA | 4 | 71219 | 71231 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 47. | NW_001092742 | TTG | 4 | 71881 | 71891 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85116197 |
| 48. | NW_001092742 | TCT | 4 | 75644 | 75654 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001092742 | GCT | 7 | 76349 | 76369 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 50. | NW_001092742 | TCT | 4 | 76382 | 76394 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 51. | NW_001092742 | TGG | 4 | 76590 | 76601 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 52. | NW_001092742 | CAG | 7 | 82541 | 82561 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85116210 |
| 53. | NW_001092742 | CTC | 4 | 84988 | 84999 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85116210 |
| 54. | NW_001092742 | GCA | 9 | 85037 | 85063 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | 85116210 |
| 55. | NW_001092742 | GAG | 4 | 85110 | 85121 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116210 |
| 56. | NW_001092742 | TCA | 4 | 85324 | 85335 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85116210 |
| 57. | NW_001092742 | CAG | 5 | 85712 | 85726 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85116210 |
| 58. | NW_001092742 | CAG | 4 | 85880 | 85891 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85116210 |
| 59. | NW_001092742 | CAC | 7 | 85889 | 85909 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85116210 |
| 60. | NW_001092742 | GAT | 4 | 86162 | 86173 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85116210 |
| 61. | NW_001092742 | GCC | 4 | 89597 | 89608 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 62. | NW_001092742 | TCT | 4 | 89887 | 89897 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 63. | NW_001092742 | TGA | 4 | 91988 | 91998 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 64. | NW_001092742 | TCT | 5 | 92113 | 92127 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 65. | NW_001092742 | GAT | 9 | 92400 | 92425 | 26 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 66. | NW_001092742 | CGG | 4 | 95620 | 95631 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116223 |
| 67. | NW_001092742 | GCT | 4 | 95911 | 95922 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116223 |
| 68. | NW_001092742 | CTG | 4 | 95945 | 95955 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85116223 |
| 69. | NW_001092742 | CTG | 17 | 95963 | 96013 | 51 | 0.00% | 33.33% | 33.33% | 33.33% | 85116223 |
| 70. | NW_001092742 | TTG | 15 | 95987 | 96031 | 45 | 0.00% | 66.67% | 33.33% | 0.00% | 85116223 |
| 71. | NW_001092742 | GTG | 5 | 96034 | 96048 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85116223 |
| 72. | NW_001092742 | TTC | 4 | 97692 | 97703 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 73. | NW_001092742 | GGT | 4 | 100658 | 100669 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 74. | NW_001092742 | ACA | 5 | 105811 | 105825 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85116236 |
| 75. | NW_001092742 | CGG | 4 | 106095 | 106106 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85116236 |
| 76. | NW_001092742 | CGT | 5 | 110741 | 110755 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85116240 |
| 77. | NW_001092742 | TCT | 4 | 111275 | 111285 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85116240 |
| 78. | NW_001092742 | CAT | 4 | 111338 | 111349 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85116240 |
| 79. | NW_001092742 | GCC | 4 | 113234 | 113245 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85116243 |
| 80. | NW_001092742 | TGA | 4 | 113342 | 113353 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85116243 |
| 81. | NW_001092742 | CTT | 4 | 115114 | 115125 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 82. | NW_001092742 | CAG | 4 | 117772 | 117783 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85116248 |
| 83. | NW_001092742 | GCT | 4 | 117850 | 117861 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85116248 |
| 84. | NW_001092742 | TCA | 4 | 118390 | 118400 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85116248 |
| 85. | NW_001092742 | AAC | 4 | 118403 | 118414 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85116248 |
| 86. | NW_001092742 | GTG | 4 | 119536 | 119546 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 87. | NW_001092742 | GGC | 4 | 126714 | 126725 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 88. | NW_001092742 | ACG | 5 | 127367 | 127381 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 89. | NW_001092742 | ACC | 5 | 127387 | 127401 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 90. | NW_001092742 | AGG | 4 | 127445 | 127456 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85116256 |
| 91. | NW_001092742 | AGC | 4 | 128219 | 128230 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85116256 |
| 92. | NW_001092742 | CTT | 4 | 128339 | 128349 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 93. | NW_001092742 | TAC | 4 | 128550 | 128560 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 94. | NW_001092742 | GAT | 4 | 128709 | 128719 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 95. | NW_001092742 | TCG | 9 | 128804 | 128830 | 27 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |