List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092742 | CGGG | 3 | 7103 | 7114 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | 85116118 |
| 2. | NW_001092742 | TTCA | 3 | 10171 | 10182 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 3. | NW_001092742 | ACCG | 3 | 20018 | 20029 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85116130 |
| 4. | NW_001092742 | GAAG | 3 | 26079 | 26089 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | 85116134 |
| 5. | NW_001092742 | ATCC | 3 | 29852 | 29863 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 6. | NW_001092742 | GGTG | 3 | 32903 | 32914 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | 85116147 |
| 7. | NW_001092742 | CGGT | 3 | 34152 | 34163 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 8. | NW_001092742 | GTAT | 3 | 34734 | 34744 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 9. | NW_001092742 | CTTT | 3 | 36351 | 36362 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092742 | ATGG | 3 | 39358 | 39368 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85116161 |
| 11. | NW_001092742 | GCTT | 3 | 39691 | 39701 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85116161 |
| 12. | NW_001092742 | GCTG | 3 | 40195 | 40205 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85116161 |
| 13. | NW_001092742 | GTAG | 3 | 40629 | 40640 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 14. | NW_001092742 | ACTG | 3 | 41160 | 41170 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 15. | NW_001092742 | TGAG | 4 | 43044 | 43059 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 16. | NW_001092742 | TCAG | 3 | 53087 | 53097 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 17. | NW_001092742 | AGGT | 5 | 54260 | 54280 | 21 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092742 | CATC | 3 | 59559 | 59569 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 19. | NW_001092742 | CTTC | 3 | 61537 | 61549 | 13 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 20. | NW_001092742 | CTAC | 3 | 64733 | 64744 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001092742 | CACC | 3 | 67822 | 67833 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 22. | NW_001092742 | TAGG | 3 | 68674 | 68685 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 23. | NW_001092742 | CCTT | 3 | 71083 | 71095 | 13 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092742 | GCAA | 3 | 73714 | 73724 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 85116197 |
| 25. | NW_001092742 | GTTT | 3 | 75379 | 75390 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092742 | GTAG | 3 | 77856 | 77867 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092742 | TTTG | 3 | 78200 | 78211 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NW_001092742 | AGCC | 3 | 84482 | 84492 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85116210 |
| 29. | NW_001092742 | CTCA | 3 | 86109 | 86120 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85116210 |
| 30. | NW_001092742 | AGAA | 3 | 87054 | 87065 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 31. | NW_001092742 | ACAA | 4 | 87246 | 87261 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 32. | NW_001092742 | CCAG | 3 | 88917 | 88927 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 33. | NW_001092742 | TAGG | 3 | 88988 | 89003 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 34. | NW_001092742 | TACC | 3 | 104973 | 104984 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092742 | GACT | 3 | 105476 | 105486 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 36. | NW_001092742 | AATG | 3 | 107740 | 107751 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 37. | NW_001092742 | CTTT | 3 | 108621 | 108631 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 38. | NW_001092742 | CATT | 3 | 109113 | 109124 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 39. | NW_001092742 | AAGC | 3 | 115836 | 115847 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 40. | NW_001092742 | GTGA | 3 | 125329 | 125339 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 41. | NW_001092742 | ACAT | 3 | 126560 | 126572 | 13 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |