List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092741 | AGTT | 3 | 1141 | 1151 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 2. | NW_001092741 | TTTA | 3 | 1815 | 1826 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092741 | TTTG | 6 | 2831 | 2854 | 24 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 4. | NW_001092741 | ATTC | 3 | 5461 | 5471 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | 85115930 |
| 5. | NW_001092741 | TAAA | 3 | 7350 | 7360 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092741 | CCCG | 3 | 7759 | 7769 | 11 | 0.00% | 0.00% | 25.00% | 75.00% | 85115934 |
| 7. | NW_001092741 | CAAA | 3 | 12192 | 12203 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092741 | AAAT | 3 | 14816 | 14827 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092741 | GTTA | 3 | 22394 | 22405 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85115951 |
| 10. | NW_001092741 | CGCT | 3 | 26395 | 26405 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85115951 |
| 11. | NW_001092741 | GGAT | 3 | 26987 | 26997 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 12. | NW_001092741 | ATTT | 3 | 31999 | 32010 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 85115955 |
| 13. | NW_001092741 | CCCT | 3 | 41249 | 41260 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85115963 |
| 14. | NW_001092741 | AAAG | 3 | 41953 | 41964 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NW_001092741 | GAGG | 3 | 44121 | 44132 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85115967 |
| 16. | NW_001092741 | GGCG | 3 | 44463 | 44475 | 13 | 0.00% | 0.00% | 75.00% | 25.00% | 85115967 |
| 17. | NW_001092741 | TTGA | 3 | 49982 | 49993 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85115971 |
| 18. | NW_001092741 | CTTC | 3 | 53626 | 53636 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | 85115979 |
| 19. | NW_001092741 | CAAA | 3 | 54900 | 54912 | 13 | 75.00% | 0.00% | 0.00% | 25.00% | 85115979 |
| 20. | NW_001092741 | GGGT | 3 | 65948 | 65958 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 21. | NW_001092741 | ATCC | 3 | 68410 | 68420 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092741 | CGGA | 3 | 71992 | 72003 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 23. | NW_001092741 | CTTT | 3 | 72353 | 72364 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 24. | NW_001092741 | CATT | 3 | 72391 | 72402 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 25. | NW_001092741 | CCGT | 3 | 73037 | 73048 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 26. | NW_001092741 | AGTA | 3 | 73086 | 73097 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85116004 |
| 27. | NW_001092741 | AGCC | 5 | 73098 | 73118 | 21 | 25.00% | 0.00% | 25.00% | 50.00% | 85116004 |
| 28. | NW_001092741 | TACT | 3 | 73294 | 73305 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 85116004 |
| 29. | NW_001092741 | GTTC | 3 | 83316 | 83327 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 30. | NW_001092741 | GCTT | 3 | 84606 | 84616 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85116012 |
| 31. | NW_001092741 | ATGG | 3 | 85416 | 85428 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 32. | NW_001092741 | CCAA | 3 | 93404 | 93415 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 85116024 |
| 33. | NW_001092741 | ACCT | 3 | 97257 | 97269 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 85116033 |
| 34. | NW_001092741 | TACA | 3 | 101038 | 101048 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NW_001092741 | TCCA | 4 | 101428 | 101447 | 20 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 36. | NW_001092741 | TACA | 3 | 103694 | 103704 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 37. | NW_001092741 | AACA | 3 | 109733 | 109743 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 38. | NW_001092741 | GGTA | 5 | 112927 | 112945 | 19 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 39. | NW_001092741 | GAAA | 3 | 117422 | 117433 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 85116050 |
| 40. | NW_001092741 | CCAG | 3 | 117477 | 117487 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85116050 |
| 41. | NW_001092741 | AGTG | 3 | 122388 | 122398 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 42. | NW_001092741 | ACGA | 3 | 124281 | 124292 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | 85116058 |
| 43. | NW_001092741 | GGCT | 3 | 125570 | 125580 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85116062 |
| 44. | NW_001092741 | CACG | 3 | 126659 | 126669 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85116066 |
| 45. | NW_001092741 | GGAT | 3 | 127047 | 127058 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85116066 |
| 46. | NW_001092741 | ATGG | 3 | 128777 | 128788 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |