List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092735 | ACC | 5 | 1019 | 1033 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85114710 |
| 2. | NW_001092735 | CAT | 4 | 1631 | 1642 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85114710 |
| 3. | NW_001092735 | GGA | 4 | 1688 | 1699 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114710 |
| 4. | NW_001092735 | ACA | 4 | 2600 | 2610 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85114710 |
| 5. | NW_001092735 | ACC | 4 | 2817 | 2828 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85114710 |
| 6. | NW_001092735 | TCG | 4 | 6085 | 6096 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85114715 |
| 7. | NW_001092735 | GGT | 4 | 7374 | 7385 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114715 |
| 8. | NW_001092735 | CAC | 5 | 9539 | 9553 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85114719 |
| 9. | NW_001092735 | TGG | 4 | 12988 | 12999 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 10. | NW_001092735 | ACA | 4 | 13739 | 13750 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114724 |
| 11. | NW_001092735 | ATG | 4 | 13838 | 13849 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85114724 |
| 12. | NW_001092735 | CAG | 7 | 15334 | 15356 | 23 | 33.33% | 0.00% | 33.33% | 33.33% | 85114724 |
| 13. | NW_001092735 | ACA | 5 | 15357 | 15371 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85114724 |
| 14. | NW_001092735 | CTT | 4 | 16710 | 16721 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001092735 | GCA | 4 | 17283 | 17294 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114729 |
| 16. | NW_001092735 | CTC | 4 | 17516 | 17527 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85114729 |
| 17. | NW_001092735 | ACG | 4 | 17615 | 17626 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114729 |
| 18. | NW_001092735 | CTC | 4 | 18099 | 18109 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85114729 |
| 19. | NW_001092735 | CGG | 4 | 18113 | 18124 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85114729 |
| 20. | NW_001092735 | GGA | 12 | 18160 | 18195 | 36 | 33.33% | 0.00% | 66.67% | 0.00% | 85114729 |
| 21. | NW_001092735 | TCT | 4 | 20215 | 20226 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85114733 |
| 22. | NW_001092735 | TCG | 4 | 21085 | 21096 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85114733 |
| 23. | NW_001092735 | TGA | 4 | 23420 | 23431 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85114738 |
| 24. | NW_001092735 | GAT | 4 | 24517 | 24527 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85114738 |
| 25. | NW_001092735 | CGA | 4 | 25681 | 25692 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114743 |
| 26. | NW_001092735 | CCT | 4 | 26339 | 26350 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001092735 | TCA | 4 | 30775 | 30786 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092735 | ATG | 4 | 30851 | 30862 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092735 | ATG | 4 | 32914 | 32924 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001092735 | GAT | 4 | 33861 | 33871 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092735 | TGT | 4 | 33987 | 33998 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092735 | ATG | 4 | 34987 | 34998 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092735 | GGA | 4 | 36121 | 36132 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 34. | NW_001092735 | AAC | 6 | 39235 | 39252 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092735 | TCC | 4 | 40574 | 40585 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 36. | NW_001092735 | GGA | 4 | 41512 | 41523 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 37. | NW_001092735 | TCT | 4 | 42673 | 42685 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092735 | GAG | 14 | 45518 | 45559 | 42 | 33.33% | 0.00% | 66.67% | 0.00% | 85114751 |
| 39. | NW_001092735 | GAT | 4 | 46883 | 46894 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 40. | NW_001092735 | CAG | 4 | 47282 | 47292 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85114756 |
| 41. | NW_001092735 | GAG | 4 | 47642 | 47653 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114756 |
| 42. | NW_001092735 | AAG | 4 | 49011 | 49022 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114760 |
| 43. | NW_001092735 | GAG | 4 | 50535 | 50546 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114760 |
| 44. | NW_001092735 | GAG | 4 | 50556 | 50567 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114760 |
| 45. | NW_001092735 | GAG | 4 | 50697 | 50708 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114760 |
| 46. | NW_001092735 | CAA | 4 | 50777 | 50788 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114760 |
| 47. | NW_001092735 | CAG | 11 | 52403 | 52434 | 32 | 33.33% | 0.00% | 33.33% | 33.33% | 85114764 |
| 48. | NW_001092735 | TTC | 4 | 53011 | 53022 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85114764 |
| 49. | NW_001092735 | GTC | 5 | 55429 | 55443 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85114768 |
| 50. | NW_001092735 | TGC | 4 | 58615 | 58626 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85114768 |
| 51. | NW_001092735 | CCG | 4 | 59523 | 59535 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 52. | NW_001092735 | GGA | 4 | 62844 | 62855 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 53. | NW_001092735 | ACG | 4 | 63412 | 63422 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 54. | NW_001092735 | GCA | 4 | 64302 | 64312 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85114777 |
| 55. | NW_001092735 | ACA | 4 | 64864 | 64875 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114777 |
| 56. | NW_001092735 | CAC | 4 | 66933 | 66944 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85114777 |
| 57. | NW_001092735 | CAA | 4 | 66954 | 66965 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114777 |
| 58. | NW_001092735 | GTT | 5 | 67492 | 67507 | 16 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 59. | NW_001092735 | GTC | 4 | 68441 | 68451 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 60. | NW_001092735 | CAT | 4 | 79065 | 79076 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 61. | NW_001092735 | CGG | 4 | 79859 | 79870 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 62. | NW_001092735 | AGG | 5 | 83394 | 83408 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85114804 |
| 63. | NW_001092735 | CTG | 4 | 84000 | 84010 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85114804 |
| 64. | NW_001092735 | CTG | 4 | 84291 | 84302 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85114804 |
| 65. | NW_001092735 | AGG | 4 | 84408 | 84419 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114804 |
| 66. | NW_001092735 | AAG | 4 | 84740 | 84751 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114804 |
| 67. | NW_001092735 | CAC | 4 | 85939 | 85949 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85114808 |
| 68. | NW_001092735 | CTC | 5 | 87759 | 87776 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 69. | NW_001092735 | TGA | 4 | 91733 | 91745 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 70. | NW_001092735 | GTC | 8 | 92506 | 92529 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85114817 |
| 71. | NW_001092735 | ATG | 4 | 92897 | 92908 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85114817 |
| 72. | NW_001092735 | CAT | 9 | 94248 | 94274 | 27 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 73. | NW_001092735 | TAG | 4 | 97914 | 97924 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 74. | NW_001092735 | GCG | 5 | 98489 | 98502 | 14 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 75. | NW_001092735 | GAA | 4 | 98588 | 98599 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 76. | NW_001092735 | ACC | 4 | 101329 | 101341 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85114822 |
| 77. | NW_001092735 | CGA | 4 | 102028 | 102039 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114822 |
| 78. | NW_001092735 | TCA | 4 | 104817 | 104828 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85114822 |
| 79. | NW_001092735 | CAA | 4 | 105173 | 105184 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114822 |
| 80. | NW_001092735 | TCA | 4 | 107751 | 107761 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 81. | NW_001092735 | CCA | 4 | 108311 | 108321 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 82. | NW_001092735 | GTG | 4 | 110501 | 110512 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114827 |
| 83. | NW_001092735 | TGG | 4 | 110546 | 110557 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114827 |
| 84. | NW_001092735 | TTC | 7 | 111617 | 111637 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 85114827 |
| 85. | NW_001092735 | AAG | 4 | 114547 | 114558 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114831 |
| 86. | NW_001092735 | ACA | 15 | 115552 | 115596 | 45 | 66.67% | 0.00% | 0.00% | 33.33% | 85114831 |
| 87. | NW_001092735 | CAA | 6 | 115722 | 115739 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | 85114831 |
| 88. | NW_001092735 | CCA | 8 | 115914 | 115937 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | 85114831 |
| 89. | NW_001092735 | CAA | 15 | 116000 | 116045 | 46 | 66.67% | 0.00% | 0.00% | 33.33% | 85114831 |
| 90. | NW_001092735 | CCA | 6 | 116063 | 116083 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85114831 |
| 91. | NW_001092735 | CTC | 4 | 117008 | 117018 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85114835 |
| 92. | NW_001092735 | GGA | 4 | 117564 | 117575 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114835 |
| 93. | NW_001092735 | GGT | 4 | 117635 | 117646 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114835 |
| 94. | NW_001092735 | GTC | 4 | 117786 | 117797 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85114835 |
| 95. | NW_001092735 | CTT | 15 | 118192 | 118233 | 42 | 0.00% | 66.67% | 0.00% | 33.33% | 85114835 |
| 96. | NW_001092735 | GAG | 5 | 118571 | 118584 | 14 | 33.33% | 0.00% | 66.67% | 0.00% | 85114835 |