List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092731 | ATT | 6 | 207 | 223 | 17 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092731 | TAT | 4 | 384 | 395 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092731 | TAT | 4 | 1179 | 1190 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092731 | TAA | 4 | 1753 | 1764 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | 85113991 |
| 5. | NW_001092731 | AAT | 4 | 1862 | 1873 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | 85113991 |
| 6. | NW_001092731 | ACT | 4 | 2166 | 2176 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092731 | TAA | 4 | 3335 | 3346 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092731 | ATA | 4 | 3663 | 3674 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092731 | TCT | 4 | 7630 | 7640 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092731 | CTG | 4 | 9339 | 9349 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 11. | NW_001092731 | ACG | 6 | 11208 | 11225 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 12. | NW_001092731 | AGC | 4 | 11596 | 11607 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114001 |
| 13. | NW_001092731 | TGC | 5 | 12966 | 12979 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001092731 | CAC | 4 | 13470 | 13481 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 15. | NW_001092731 | AAG | 4 | 16401 | 16411 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85114005 |
| 16. | NW_001092731 | TCT | 4 | 17423 | 17433 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092731 | TGC | 4 | 17677 | 17688 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 18. | NW_001092731 | GAA | 4 | 17857 | 17867 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 19. | NW_001092731 | CCT | 4 | 18400 | 18411 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 20. | NW_001092731 | CTC | 4 | 18410 | 18421 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 21. | NW_001092731 | TGT | 4 | 20280 | 20290 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85114009 |
| 22. | NW_001092731 | GTT | 4 | 20996 | 21008 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | 85114009 |
| 23. | NW_001092731 | TTC | 4 | 22261 | 22272 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 24. | NW_001092731 | CAC | 4 | 22551 | 22563 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 25. | NW_001092731 | GGA | 4 | 23083 | 23093 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 26. | NW_001092731 | CGG | 4 | 23545 | 23555 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 27. | NW_001092731 | CGG | 8 | 24125 | 24148 | 24 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 28. | NW_001092731 | TGG | 4 | 24719 | 24730 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 29. | NW_001092731 | GCA | 5 | 26761 | 26774 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 30. | NW_001092731 | CAA | 8 | 29025 | 29049 | 25 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 31. | NW_001092731 | AGA | 4 | 30781 | 30792 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092731 | CTC | 6 | 32490 | 32506 | 17 | 0.00% | 33.33% | 0.00% | 66.67% | 85114021 |
| 33. | NW_001092731 | TCC | 4 | 33929 | 33940 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85114021 |
| 34. | NW_001092731 | CAG | 4 | 34294 | 34305 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114021 |
| 35. | NW_001092731 | ACC | 5 | 35622 | 35636 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85114021 |
| 36. | NW_001092731 | TGG | 4 | 36350 | 36362 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 37. | NW_001092731 | GCG | 4 | 37343 | 37355 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85114026 |
| 38. | NW_001092731 | GAA | 4 | 37370 | 37381 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114026 |
| 39. | NW_001092731 | GGC | 5 | 37507 | 37521 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85114026 |
| 40. | NW_001092731 | TGT | 5 | 39073 | 39087 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85114030 |
| 41. | NW_001092731 | TGC | 5 | 39085 | 39099 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85114030 |
| 42. | NW_001092731 | CCG | 4 | 39194 | 39205 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85114030 |
| 43. | NW_001092731 | GTG | 4 | 39460 | 39471 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114030 |
| 44. | NW_001092731 | AGG | 4 | 39889 | 39901 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85114030 |
| 45. | NW_001092731 | CGA | 4 | 42679 | 42690 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114038 |
| 46. | NW_001092731 | ACA | 4 | 42955 | 42966 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114038 |
| 47. | NW_001092731 | GAG | 4 | 43478 | 43489 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114038 |
| 48. | NW_001092731 | CAG | 4 | 43869 | 43881 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001092731 | AGG | 4 | 43966 | 43977 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 50. | NW_001092731 | CTT | 5 | 45224 | 45238 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 51. | NW_001092731 | CCT | 4 | 45233 | 45244 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 52. | NW_001092731 | ATC | 8 | 45442 | 45465 | 24 | 33.33% | 33.33% | 0.00% | 33.33% | 85114043 |
| 53. | NW_001092731 | CCA | 4 | 45601 | 45612 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85114043 |
| 54. | NW_001092731 | GGA | 4 | 45826 | 45837 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114043 |
| 55. | NW_001092731 | GAG | 5 | 45836 | 45850 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85114043 |
| 56. | NW_001092731 | GGC | 4 | 45934 | 45945 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85114043 |
| 57. | NW_001092731 | AGC | 4 | 46584 | 46595 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114043 |
| 58. | NW_001092731 | AGG | 4 | 46593 | 46604 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114043 |
| 59. | NW_001092731 | GGC | 7 | 46645 | 46668 | 24 | 0.00% | 0.00% | 66.67% | 33.33% | 85114043 |
| 60. | NW_001092731 | GTG | 4 | 46980 | 46990 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85114043 |
| 61. | NW_001092731 | GTC | 4 | 47450 | 47460 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85114043 |
| 62. | NW_001092731 | GGT | 4 | 51435 | 51448 | 14 | 0.00% | 33.33% | 66.67% | 0.00% | 85114051 |
| 63. | NW_001092731 | CGG | 4 | 51986 | 51997 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85114051 |
| 64. | NW_001092731 | ACC | 4 | 53020 | 53032 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 65. | NW_001092731 | TGA | 4 | 53905 | 53916 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 66. | NW_001092731 | GGC | 4 | 54304 | 54316 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 67. | NW_001092731 | GTC | 4 | 55138 | 55149 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 68. | NW_001092731 | ACA | 5 | 59970 | 59984 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 69. | NW_001092731 | AGA | 5 | 60971 | 60985 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85114063 |
| 70. | NW_001092731 | GCA | 4 | 61775 | 61785 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85114063 |
| 71. | NW_001092731 | CGC | 4 | 62935 | 62946 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85114063 |
| 72. | NW_001092731 | GAC | 4 | 63488 | 63499 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114063 |
| 73. | NW_001092731 | AAT | 4 | 64385 | 64396 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | 85114063 |
| 74. | NW_001092731 | GCG | 4 | 64856 | 64866 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85114063 |
| 75. | NW_001092731 | GGC | 4 | 65559 | 65569 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 76. | NW_001092731 | GCA | 4 | 65848 | 65858 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 77. | NW_001092731 | TCA | 4 | 68647 | 68657 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 78. | NW_001092731 | TTC | 4 | 68909 | 68920 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 79. | NW_001092731 | TGA | 4 | 69959 | 69970 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 80. | NW_001092731 | ACC | 4 | 70040 | 70050 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 81. | NW_001092731 | CGC | 4 | 70353 | 70364 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 82. | NW_001092731 | AGT | 4 | 71923 | 71933 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85114071 |
| 83. | NW_001092731 | ACG | 4 | 72467 | 72477 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85114071 |
| 84. | NW_001092731 | GAA | 4 | 73015 | 73026 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114071 |
| 85. | NW_001092731 | TCA | 4 | 73040 | 73050 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85114071 |
| 86. | NW_001092731 | AAG | 4 | 73408 | 73419 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114071 |
| 87. | NW_001092731 | CTC | 5 | 73990 | 74004 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85114071 |
| 88. | NW_001092731 | CTC | 4 | 74151 | 74163 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 85114071 |
| 89. | NW_001092731 | CCG | 4 | 74214 | 74225 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85114071 |
| 90. | NW_001092731 | ATC | 12 | 74288 | 74324 | 37 | 33.33% | 33.33% | 0.00% | 33.33% | 85114071 |
| 91. | NW_001092731 | TCC | 4 | 74517 | 74528 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85114071 |
| 92. | NW_001092731 | TCT | 5 | 74530 | 74544 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85114071 |
| 93. | NW_001092731 | CAA | 8 | 74573 | 74596 | 24 | 66.67% | 0.00% | 0.00% | 33.33% | 85114071 |
| 94. | NW_001092731 | ACA | 4 | 74596 | 74607 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114071 |
| 95. | NW_001092731 | AGG | 4 | 74894 | 74904 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85114071 |
| 96. | NW_001092731 | TCT | 7 | 75798 | 75818 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 85114075 |
| 97. | NW_001092731 | GTG | 8 | 76520 | 76543 | 24 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 98. | NW_001092731 | GTC | 4 | 76578 | 76589 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 99. | NW_001092731 | GAC | 4 | 76646 | 76657 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 100. | NW_001092731 | TGT | 4 | 76786 | 76797 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 101. | NW_001092731 | GGT | 11 | 76909 | 76941 | 33 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 102. | NW_001092731 | ACG | 4 | 77695 | 77706 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 103. | NW_001092731 | GGT | 4 | 80110 | 80121 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114079 |
| 104. | NW_001092731 | CAA | 4 | 80408 | 80419 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114079 |
| 105. | NW_001092731 | AGA | 4 | 80758 | 80769 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 106. | NW_001092731 | GTC | 5 | 81327 | 81341 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 107. | NW_001092731 | TCT | 4 | 82039 | 82051 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 108. | NW_001092731 | GAC | 4 | 86854 | 86865 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114083 |
| 109. | NW_001092731 | GTG | 7 | 88616 | 88636 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 110. | NW_001092731 | GTA | 4 | 89973 | 89984 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85114087 |
| 111. | NW_001092731 | GAG | 4 | 90107 | 90117 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85114087 |
| 112. | NW_001092731 | GGT | 4 | 90119 | 90130 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85114087 |
| 113. | NW_001092731 | GAT | 4 | 90172 | 90183 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 114. | NW_001092731 | TGA | 4 | 90192 | 90203 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 115. | NW_001092731 | TCC | 7 | 91122 | 91142 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | 85114092 |
| 116. | NW_001092731 | CAA | 4 | 94940 | 94951 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85114097 |
| 117. | NW_001092731 | AAG | 4 | 95583 | 95594 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85114097 |
| 118. | NW_001092731 | GAT | 4 | 95852 | 95862 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 119. | NW_001092731 | TGA | 4 | 98453 | 98464 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 120. | NW_001092731 | TCT | 4 | 98866 | 98877 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85114105 |
| 121. | NW_001092731 | CTC | 5 | 99130 | 99144 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85114105 |
| 122. | NW_001092731 | CCA | 4 | 99219 | 99230 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85114105 |
| 123. | NW_001092731 | CCA | 4 | 99243 | 99255 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85114105 |
| 124. | NW_001092731 | GGT | 9 | 99521 | 99547 | 27 | 0.00% | 33.33% | 66.67% | 0.00% | 85114105 |
| 125. | NW_001092731 | GTG | 5 | 99865 | 99882 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85114105 |
| 126. | NW_001092731 | TTG | 4 | 100000 | 100011 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 127. | NW_001092731 | GTC | 4 | 101486 | 101497 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 128. | NW_001092731 | CAA | 5 | 103568 | 103582 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 129. | NW_001092731 | GTC | 5 | 103810 | 103824 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 130. | NW_001092731 | GGA | 12 | 103828 | 103863 | 36 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 131. | NW_001092731 | CGA | 4 | 105046 | 105057 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85114113 |
| 132. | NW_001092731 | CCA | 6 | 105264 | 105281 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | 85114113 |
| 133. | NW_001092731 | AGT | 4 | 105536 | 105547 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85114113 |
| 134. | NW_001092731 | GAG | 4 | 105639 | 105650 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85114113 |
| 135. | NW_001092731 | TGA | 9 | 105684 | 105710 | 27 | 33.33% | 33.33% | 33.33% | 0.00% | 85114113 |
| 136. | NW_001092731 | ATG | 4 | 105803 | 105814 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85114113 |
| 137. | NW_001092731 | CGT | 4 | 106206 | 106216 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85114113 |
| 138. | NW_001092731 | TGT | 4 | 106750 | 106760 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |