List of
Perfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092731 | AATT | 3 | 2449 | 2460 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092731 | ATTA | 3 | 4092 | 4103 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092731 | ATAG | 3 | 6233 | 6244 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 4. | NW_001092731 | CCTC | 3 | 17719 | 17730 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 5. | NW_001092731 | TTCG | 4 | 18005 | 18020 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092731 | TTCA | 3 | 18021 | 18032 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NW_001092731 | TTCA | 3 | 18043 | 18054 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092731 | TTCA | 3 | 18065 | 18076 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092731 | TTCA | 3 | 18087 | 18098 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092731 | TTCA | 4 | 18109 | 18124 | 16 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 11. | NW_001092731 | TTCG | 4 | 18125 | 18140 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001092731 | ATCG | 4 | 18465 | 18480 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 13. | NW_001092731 | CCTG | 4 | 18803 | 18818 | 16 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 14. | NW_001092731 | GTAT | 3 | 21397 | 21408 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NW_001092731 | ATGT | 3 | 23189 | 23200 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NW_001092731 | GAGC | 3 | 25351 | 25362 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85114013 |
| 17. | NW_001092731 | CAGG | 5 | 26551 | 26570 | 20 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 18. | NW_001092731 | TAGG | 3 | 44900 | 44911 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 19. | NW_001092731 | TAAG | 3 | 44912 | 44923 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 20. | NW_001092731 | TTCC | 4 | 45177 | 45192 | 16 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001092731 | TACC | 3 | 48713 | 48724 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092731 | TACA | 3 | 49687 | 49698 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NW_001092731 | GAGG | 3 | 53654 | 53665 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85114055 |
| 24. | NW_001092731 | TGTT | 7 | 53790 | 53817 | 28 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NW_001092731 | TCTT | 4 | 53865 | 53880 | 16 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 26. | NW_001092731 | TTGG | 3 | 54803 | 54814 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092731 | GCTT | 4 | 59638 | 59653 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 28. | NW_001092731 | GTAG | 3 | 65299 | 65310 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 29. | NW_001092731 | ACCT | 3 | 65940 | 65951 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092731 | GCGG | 3 | 66059 | 66070 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 31. | NW_001092731 | GGAC | 3 | 66808 | 66819 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 32. | NW_001092731 | CCTT | 3 | 67086 | 67097 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 33. | NW_001092731 | GGCG | 3 | 68784 | 68795 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 34. | NW_001092731 | GTAA | 5 | 70051 | 70070 | 20 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 35. | NW_001092731 | AGAA | 4 | 70249 | 70264 | 16 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 36. | NW_001092731 | CGTG | 3 | 70335 | 70346 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 37. | NW_001092731 | ATGG | 3 | 70398 | 70409 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 38. | NW_001092731 | TGGA | 3 | 70412 | 70423 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 39. | NW_001092731 | CAGG | 3 | 71179 | 71190 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 40. | NW_001092731 | AAAG | 3 | 72148 | 72159 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 85114071 |
| 41. | NW_001092731 | TAGG | 4 | 72205 | 72220 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | 85114071 |
| 42. | NW_001092731 | CTAC | 3 | 78192 | 78203 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 43. | NW_001092731 | GTAG | 4 | 89948 | 89963 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | 85114087 |
| 44. | NW_001092731 | GCGA | 3 | 89985 | 89996 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85114087 |
| 45. | NW_001092731 | GATT | 3 | 90154 | 90165 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 46. | NW_001092731 | AGGT | 3 | 99898 | 99909 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85114105 |
| 47. | NW_001092731 | TGGT | 3 | 106346 | 106357 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |