List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092721 | GTT | 4 | 550 | 561 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 2. | NW_001092721 | ACA | 4 | 564 | 575 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092721 | GTG | 4 | 13888 | 13899 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 4. | NW_001092721 | GGC | 4 | 14629 | 14640 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85112510 |
| 5. | NW_001092721 | GCA | 4 | 14972 | 14983 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112510 |
| 6. | NW_001092721 | GGA | 5 | 15031 | 15045 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85112510 |
| 7. | NW_001092721 | AGG | 4 | 15176 | 15187 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112510 |
| 8. | NW_001092721 | GGA | 4 | 15465 | 15477 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 9. | NW_001092721 | TGT | 4 | 18010 | 18021 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092721 | GGT | 7 | 18379 | 18399 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85112514 |
| 11. | NW_001092721 | AGG | 4 | 18864 | 18875 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112514 |
| 12. | NW_001092721 | CTT | 4 | 19508 | 19519 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85112518 |
| 13. | NW_001092721 | CTC | 5 | 19517 | 19532 | 16 | 0.00% | 33.33% | 0.00% | 66.67% | 85112518 |
| 14. | NW_001092721 | TGA | 4 | 19687 | 19698 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112518 |
| 15. | NW_001092721 | GAT | 4 | 21062 | 21074 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 16. | NW_001092721 | CAC | 8 | 26582 | 26605 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 17. | NW_001092721 | CAA | 5 | 26668 | 26681 | 14 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092721 | GGA | 7 | 26903 | 26924 | 22 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 19. | NW_001092721 | AGA | 5 | 27543 | 27557 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092721 | CAA | 4 | 32220 | 32231 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092721 | CTT | 5 | 32712 | 32726 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85112539 |
| 22. | NW_001092721 | CAG | 9 | 32737 | 32764 | 28 | 33.33% | 0.00% | 33.33% | 33.33% | 85112539 |
| 23. | NW_001092721 | ACC | 4 | 32996 | 33006 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85112539 |
| 24. | NW_001092721 | GCA | 4 | 34869 | 34880 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112543 |
| 25. | NW_001092721 | CAA | 5 | 37357 | 37372 | 16 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092721 | GTC | 5 | 40362 | 40377 | 16 | 0.00% | 33.33% | 33.33% | 33.33% | 85112552 |
| 27. | NW_001092721 | TTG | 4 | 41229 | 41240 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 28. | NW_001092721 | CTT | 4 | 42435 | 42445 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85112556 |
| 29. | NW_001092721 | GGA | 4 | 43578 | 43589 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112556 |
| 30. | NW_001092721 | ACC | 9 | 43662 | 43688 | 27 | 33.33% | 0.00% | 0.00% | 66.67% | 85112556 |
| 31. | NW_001092721 | GCT | 4 | 43695 | 43706 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85112556 |
| 32. | NW_001092721 | TGA | 4 | 43892 | 43903 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112556 |
| 33. | NW_001092721 | GAG | 4 | 44276 | 44287 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112556 |
| 34. | NW_001092721 | TTC | 6 | 44437 | 44455 | 19 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092721 | TGG | 4 | 45618 | 45629 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 36. | NW_001092721 | CTC | 4 | 46348 | 46359 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85112560 |
| 37. | NW_001092721 | CGA | 4 | 47200 | 47210 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85112560 |
| 38. | NW_001092721 | GGC | 4 | 47826 | 47838 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85112560 |
| 39. | NW_001092721 | CCA | 4 | 48497 | 48508 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 40. | NW_001092721 | CCG | 8 | 50284 | 50307 | 24 | 0.00% | 0.00% | 33.33% | 66.67% | 85112564 |
| 41. | NW_001092721 | CGC | 4 | 50579 | 50590 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85112564 |
| 42. | NW_001092721 | GCA | 7 | 50610 | 50630 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85112564 |
| 43. | NW_001092721 | TCT | 4 | 51722 | 51733 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092721 | AGA | 4 | 52030 | 52042 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85112569 |
| 45. | NW_001092721 | GTG | 4 | 53619 | 53629 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85112569 |
| 46. | NW_001092721 | GGA | 4 | 53725 | 53736 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112569 |
| 47. | NW_001092721 | GAG | 5 | 53866 | 53880 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85112569 |
| 48. | NW_001092721 | CTT | 13 | 54609 | 54647 | 39 | 0.00% | 66.67% | 0.00% | 33.33% | 85112573 |
| 49. | NW_001092721 | GGT | 5 | 54853 | 54867 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85112573 |
| 50. | NW_001092721 | GAG | 4 | 55006 | 55016 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85112573 |
| 51. | NW_001092721 | TGT | 4 | 56165 | 56176 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85112573 |
| 52. | NW_001092721 | CAA | 8 | 57795 | 57818 | 24 | 66.67% | 0.00% | 0.00% | 33.33% | 85112577 |
| 53. | NW_001092721 | GAC | 4 | 58759 | 58772 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | 85112577 |
| 54. | NW_001092721 | GAG | 4 | 58935 | 58946 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112577 |
| 55. | NW_001092721 | CAT | 12 | 62498 | 62533 | 36 | 33.33% | 33.33% | 0.00% | 33.33% | 85112585 |
| 56. | NW_001092721 | AGC | 4 | 63355 | 63366 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112585 |
| 57. | NW_001092721 | GTT | 5 | 64342 | 64356 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 58. | NW_001092721 | CAT | 4 | 66355 | 66366 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85112589 |
| 59. | NW_001092721 | GCA | 4 | 66381 | 66392 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112589 |
| 60. | NW_001092721 | AAC | 7 | 66476 | 66496 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85112589 |
| 61. | NW_001092721 | GAG | 5 | 66705 | 66719 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85112589 |
| 62. | NW_001092721 | ATG | 4 | 66720 | 66730 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85112589 |
| 63. | NW_001092721 | TTG | 4 | 67901 | 67912 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85112594 |
| 64. | NW_001092721 | ACG | 5 | 69384 | 69397 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 65. | NW_001092721 | AGA | 4 | 71386 | 71396 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 66. | NW_001092721 | AGT | 4 | 72079 | 72090 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112598 |
| 67. | NW_001092721 | CCA | 4 | 73108 | 73118 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 68. | NW_001092721 | GAG | 4 | 73256 | 73267 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 69. | NW_001092721 | ACA | 4 | 73517 | 73528 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 70. | NW_001092721 | AGG | 5 | 78264 | 78278 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85112602 |
| 71. | NW_001092721 | GCT | 4 | 78359 | 78370 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85112602 |
| 72. | NW_001092721 | GGA | 4 | 79186 | 79197 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112602 |
| 73. | NW_001092721 | TCG | 4 | 81674 | 81685 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85112602 |
| 74. | NW_001092721 | TCC | 4 | 83513 | 83523 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 75. | NW_001092721 | CGG | 4 | 84201 | 84211 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85112606 |