List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092721 | ACCA | 4 | 13626 | 13640 | 15 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 2. | NW_001092721 | CAAG | 3 | 14176 | 14187 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 3. | NW_001092721 | ATGG | 3 | 15236 | 15247 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 4. | NW_001092721 | GGTA | 3 | 19159 | 19171 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 5. | NW_001092721 | TGAT | 3 | 20496 | 20506 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | 85112518 |
| 6. | NW_001092721 | GTAT | 3 | 21045 | 21056 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 7. | NW_001092721 | ACGC | 3 | 22408 | 22418 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85112522 |
| 8. | NW_001092721 | CAAC | 3 | 22976 | 22987 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 85112522 |
| 9. | NW_001092721 | ATAC | 3 | 24787 | 24797 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 10. | NW_001092721 | TGAC | 3 | 25231 | 25242 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 11. | NW_001092721 | AGAA | 3 | 26185 | 26197 | 13 | 75.00% | 0.00% | 25.00% | 0.00% | 85112531 |
| 12. | NW_001092721 | AAGG | 3 | 26360 | 26371 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85112531 |
| 13. | NW_001092721 | GAAG | 3 | 30142 | 30153 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 14. | NW_001092721 | GCGG | 4 | 35790 | 35805 | 16 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 15. | NW_001092721 | AACT | 3 | 38179 | 38190 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 16. | NW_001092721 | GTTG | 3 | 40212 | 40222 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | 85112552 |
| 17. | NW_001092721 | TGTC | 3 | 41644 | 41656 | 13 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 18. | NW_001092721 | CTTT | 3 | 42099 | 42110 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 19. | NW_001092721 | AGCC | 3 | 46985 | 46995 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85112560 |
| 20. | NW_001092721 | GGTT | 3 | 47738 | 47749 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | 85112560 |
| 21. | NW_001092721 | CTAC | 3 | 47760 | 47771 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85112560 |
| 22. | NW_001092721 | AGCC | 3 | 56875 | 56886 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 23. | NW_001092721 | TACC | 3 | 57570 | 57580 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092721 | CGAA | 4 | 59055 | 59070 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 25. | NW_001092721 | TCCC | 3 | 64823 | 64834 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 26. | NW_001092721 | CTCA | 3 | 65476 | 65487 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 27. | NW_001092721 | AGCT | 3 | 65612 | 65622 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 28. | NW_001092721 | TCAT | 3 | 70825 | 70836 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NW_001092721 | GGGC | 3 | 72961 | 72972 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 30. | NW_001092721 | CTAC | 3 | 73361 | 73372 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NW_001092721 | GGAT | 7 | 73712 | 73739 | 28 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 32. | NW_001092721 | TAGG | 3 | 74037 | 74048 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 33. | NW_001092721 | CCGT | 3 | 74624 | 74635 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 34. | NW_001092721 | CCCG | 3 | 74706 | 74717 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 35. | NW_001092721 | GCCG | 3 | 82950 | 82961 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 36. | NW_001092721 | ACGA | 3 | 83655 | 83666 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | 85112606 |