List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092716 | GAC | 5 | 188 | 201 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 2. | NW_001092716 | GGT | 4 | 330 | 342 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 3. | NW_001092716 | TCA | 5 | 928 | 942 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85074672 |
| 4. | NW_001092716 | GGC | 4 | 1054 | 1065 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85074672 |
| 5. | NW_001092716 | TCC | 4 | 1776 | 1787 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85074672 |
| 6. | NW_001092716 | GAG | 4 | 2446 | 2456 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85074672 |
| 7. | NW_001092716 | TGC | 14 | 4454 | 4495 | 42 | 0.00% | 33.33% | 33.33% | 33.33% | 85074672 |
| 8. | NW_001092716 | GAG | 4 | 4504 | 4514 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85074672 |
| 9. | NW_001092716 | TCT | 4 | 6163 | 6174 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092716 | GTT | 42 | 8207 | 8331 | 125 | 0.00% | 66.67% | 33.33% | 0.00% | 85074674 |
| 11. | NW_001092716 | TTG | 4 | 10871 | 10882 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 12. | NW_001092716 | TGA | 4 | 11055 | 11066 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092716 | CTT | 5 | 13440 | 13454 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001092716 | GAT | 4 | 15507 | 15520 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | 85074676 |
| 15. | NW_001092716 | CTT | 5 | 16285 | 16299 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85074676 |
| 16. | NW_001092716 | CGT | 4 | 19202 | 19213 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 17. | NW_001092716 | GCA | 4 | 20970 | 20981 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85074678 |
| 18. | NW_001092716 | GAC | 4 | 21659 | 21670 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85074678 |
| 19. | NW_001092716 | TGC | 7 | 21761 | 21781 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85074678 |
| 20. | NW_001092716 | ACA | 4 | 22826 | 22840 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85074680 |
| 21. | NW_001092716 | CAA | 9 | 22864 | 22890 | 27 | 66.67% | 0.00% | 0.00% | 33.33% | 85074680 |
| 22. | NW_001092716 | TGG | 4 | 25278 | 25289 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092716 | GAG | 4 | 25422 | 25433 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 24. | NW_001092716 | GTG | 4 | 25709 | 25720 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 25. | NW_001092716 | TGC | 4 | 26010 | 26021 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 26. | NW_001092716 | ACG | 5 | 26021 | 26035 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 27. | NW_001092716 | GAG | 4 | 26233 | 26244 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092716 | CCA | 16 | 26747 | 26794 | 48 | 33.33% | 0.00% | 0.00% | 66.67% | 85074682 |
| 29. | NW_001092716 | GGA | 4 | 31984 | 31995 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 30. | NW_001092716 | CTG | 4 | 33866 | 33877 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85074684 |
| 31. | NW_001092716 | GAA | 4 | 36818 | 36829 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092716 | CTT | 4 | 36990 | 37001 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001092716 | ACG | 4 | 38850 | 38861 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 34. | NW_001092716 | TTC | 4 | 39463 | 39473 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092716 | AGT | 4 | 40383 | 40393 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092716 | GAA | 5 | 43482 | 43496 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 37. | NW_001092716 | GAT | 5 | 43589 | 43603 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 38. | NW_001092716 | GGC | 4 | 44176 | 44186 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 39. | NW_001092716 | CCT | 4 | 44819 | 44830 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85074688 |
| 40. | NW_001092716 | CTG | 11 | 48091 | 48122 | 32 | 0.00% | 33.33% | 33.33% | 33.33% | 85074690 |
| 41. | NW_001092716 | TTG | 12 | 48120 | 48155 | 36 | 0.00% | 66.67% | 33.33% | 0.00% | 85074690 |
| 42. | NW_001092716 | TGC | 4 | 50779 | 50790 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 43. | NW_001092716 | TCT | 4 | 53736 | 53748 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092716 | CCG | 7 | 55276 | 55296 | 21 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 45. | NW_001092716 | GAT | 5 | 56568 | 56582 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 46. | NW_001092716 | GAT | 4 | 57346 | 57356 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 47. | NW_001092716 | CTT | 4 | 57868 | 57882 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 48. | NW_001092716 | GGT | 4 | 58321 | 58332 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85074694 |
| 49. | NW_001092716 | TGG | 4 | 58806 | 58817 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85074694 |
| 50. | NW_001092716 | GGT | 4 | 59248 | 59259 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85074694 |
| 51. | NW_001092716 | AGC | 4 | 61484 | 61494 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85074694 |
| 52. | NW_001092716 | AGA | 4 | 62534 | 62545 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092716 | GAT | 4 | 65948 | 65958 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 54. | NW_001092716 | TGC | 4 | 68778 | 68788 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 55. | NW_001092716 | CAC | 4 | 71161 | 71171 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85074700 |
| 56. | NW_001092716 | CAC | 4 | 71427 | 71438 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85074700 |
| 57. | NW_001092716 | GTC | 5 | 71912 | 71926 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 58. | NW_001092716 | GAG | 4 | 72157 | 72167 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 59. | NW_001092716 | ACG | 7 | 73933 | 73956 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 60. | NW_001092716 | TCC | 5 | 73958 | 73972 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 61. | NW_001092716 | TCG | 4 | 75423 | 75434 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 62. | NW_001092716 | TAA | 4 | 76832 | 76843 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092716 | ATT | 4 | 77367 | 77379 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 64. | NW_001092716 | ATT | 4 | 77711 | 77723 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092716 | TAA | 4 | 77817 | 77828 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092716 | TAT | 4 | 77883 | 77894 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 67. | NW_001092716 | TAT | 4 | 77927 | 77939 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |