List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092716 | GGGA | 3 | 258 | 269 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 2. | NW_001092716 | GGCA | 3 | 3805 | 3815 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85074672 |
| 3. | NW_001092716 | CATC | 8 | 5871 | 5901 | 31 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NW_001092716 | TTGG | 3 | 6625 | 6635 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 5. | NW_001092716 | TTCC | 3 | 7412 | 7423 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 6. | NW_001092716 | AATC | 3 | 7517 | 7528 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NW_001092716 | TCCT | 4 | 11900 | 11915 | 16 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 8. | NW_001092716 | AAGC | 3 | 12560 | 12570 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NW_001092716 | AGAA | 8 | 12605 | 12635 | 31 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 10. | NW_001092716 | GGCC | 3 | 16540 | 16551 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 11. | NW_001092716 | TGGG | 3 | 16560 | 16571 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 12. | NW_001092716 | TGGT | 4 | 20025 | 20041 | 17 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 13. | NW_001092716 | CCTC | 3 | 20928 | 20940 | 13 | 0.00% | 25.00% | 0.00% | 75.00% | 85074678 |
| 14. | NW_001092716 | GCAG | 8 | 22466 | 22496 | 31 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 15. | NW_001092716 | GAAC | 5 | 23960 | 23979 | 20 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092716 | CCTT | 3 | 33262 | 33273 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85074684 |
| 17. | NW_001092716 | CGGC | 3 | 33387 | 33398 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | 85074684 |
| 18. | NW_001092716 | TGTT | 3 | 33482 | 33493 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | 85074684 |
| 19. | NW_001092716 | GGCA | 3 | 39909 | 39921 | 13 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 20. | NW_001092716 | TCCC | 3 | 42875 | 42886 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 21. | NW_001092716 | GAGT | 6 | 43184 | 43207 | 24 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 22. | NW_001092716 | AGGT | 7 | 43276 | 43303 | 28 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 23. | NW_001092716 | GGTT | 3 | 43695 | 43705 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 24. | NW_001092716 | GGTA | 3 | 49301 | 49311 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001092716 | AAAG | 3 | 51784 | 51796 | 13 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092716 | ACGC | 3 | 52734 | 52745 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 27. | NW_001092716 | TAGG | 5 | 54618 | 54637 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 28. | NW_001092716 | TCTT | 5 | 54803 | 54822 | 20 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NW_001092716 | ACAT | 3 | 55479 | 55490 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 30. | NW_001092716 | TAGC | 3 | 55783 | 55794 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 31. | NW_001092716 | GATC | 6 | 55938 | 55961 | 24 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 32. | NW_001092716 | TAGG | 4 | 56540 | 56555 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 33. | NW_001092716 | TAGG | 6 | 57021 | 57044 | 24 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 34. | NW_001092716 | GCTC | 5 | 57607 | 57630 | 24 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 35. | NW_001092716 | CTGC | 3 | 65438 | 65449 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 36. | NW_001092716 | AAGA | 3 | 68009 | 68020 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 37. | NW_001092716 | GGTT | 3 | 68912 | 68924 | 13 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 38. | NW_001092716 | GCTC | 4 | 69042 | 69056 | 15 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 39. | NW_001092716 | GGCA | 3 | 69823 | 69834 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 40. | NW_001092716 | CCGG | 3 | 69928 | 69939 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 41. | NW_001092716 | CCCA | 4 | 70427 | 70442 | 16 | 25.00% | 0.00% | 0.00% | 75.00% | 85074700 |
| 42. | NW_001092716 | TCTA | 3 | 70457 | 70468 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 85074700 |
| 43. | NW_001092716 | GCAA | 4 | 72286 | 72301 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 44. | NW_001092716 | GATG | 8 | 72312 | 72342 | 31 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 45. | NW_001092716 | ATTA | 3 | 76764 | 76774 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 46. | NW_001092716 | ATTA | 4 | 78091 | 78105 | 15 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |