List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092715 | TCT | 4 | 2312 | 2323 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85112035 |
| 2. | NW_001092715 | GGT | 4 | 2625 | 2636 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85112035 |
| 3. | NW_001092715 | CGT | 5 | 2777 | 2791 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85112035 |
| 4. | NW_001092715 | TGA | 4 | 3433 | 3443 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092715 | GCT | 4 | 3829 | 3840 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 6. | NW_001092715 | GGA | 4 | 3855 | 3866 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 7. | NW_001092715 | GAA | 4 | 4369 | 4379 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 8. | NW_001092715 | CAC | 4 | 6904 | 6915 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 9. | NW_001092715 | CGA | 4 | 18740 | 18750 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 10. | NW_001092715 | GCA | 4 | 20475 | 20485 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 11. | NW_001092715 | GAC | 4 | 21215 | 21226 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 12. | NW_001092715 | ACC | 4 | 23370 | 23381 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 13. | NW_001092715 | GGA | 4 | 24796 | 24806 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85112043 |
| 14. | NW_001092715 | TGA | 4 | 25753 | 25764 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112043 |
| 15. | NW_001092715 | CGC | 4 | 27791 | 27803 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 16. | NW_001092715 | CGT | 10 | 30741 | 30770 | 30 | 0.00% | 33.33% | 33.33% | 33.33% | 85112047 |
| 17. | NW_001092715 | GCG | 4 | 30924 | 30935 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85112047 |
| 18. | NW_001092715 | TCA | 4 | 32295 | 32306 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85112049 |
| 19. | NW_001092715 | AGA | 4 | 33221 | 33232 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85112049 |
| 20. | NW_001092715 | ATC | 4 | 36302 | 36313 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092715 | GAG | 6 | 38979 | 38996 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | 85112053 |
| 22. | NW_001092715 | TGG | 4 | 40696 | 40707 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85112055 |
| 23. | NW_001092715 | TCC | 4 | 44082 | 44093 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85112057 |
| 24. | NW_001092715 | GAA | 4 | 44341 | 44352 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85112057 |
| 25. | NW_001092715 | AGC | 5 | 46533 | 46547 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85112057 |
| 26. | NW_001092715 | GTT | 4 | 48196 | 48207 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092715 | GAC | 4 | 49417 | 49428 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 28. | NW_001092715 | CGA | 4 | 52942 | 52953 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112061 |
| 29. | NW_001092715 | GGA | 4 | 59679 | 59689 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85112063 |
| 30. | NW_001092715 | GAA | 5 | 60146 | 60160 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85112063 |
| 31. | NW_001092715 | AGA | 4 | 60378 | 60388 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85112063 |
| 32. | NW_001092715 | GAG | 4 | 60443 | 60454 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112063 |
| 33. | NW_001092715 | TCG | 5 | 62024 | 62038 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85112065 |
| 34. | NW_001092715 | GAC | 5 | 63662 | 63676 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 35. | NW_001092715 | CGA | 4 | 63679 | 63690 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 36. | NW_001092715 | TGC | 4 | 63995 | 64006 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85112067 |
| 37. | NW_001092715 | AGC | 4 | 64943 | 64954 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112067 |
| 38. | NW_001092715 | CAG | 5 | 64967 | 64980 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | 85112067 |
| 39. | NW_001092715 | GCA | 4 | 64992 | 65004 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 85112067 |
| 40. | NW_001092715 | AGG | 4 | 65765 | 65776 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85112067 |
| 41. | NW_001092715 | GTC | 4 | 68218 | 68229 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 42. | NW_001092715 | GTC | 5 | 69423 | 69437 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85112069 |
| 43. | NW_001092715 | GTC | 5 | 69542 | 69556 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85112069 |
| 44. | NW_001092715 | TTC | 4 | 70731 | 70742 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |