List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092714 | AGA | 4 | 7140 | 7150 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 2. | NW_001092714 | GAC | 4 | 7182 | 7193 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111996 |
| 3. | NW_001092714 | GGA | 4 | 8251 | 8262 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111996 |
| 4. | NW_001092714 | CCA | 4 | 8422 | 8433 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111996 |
| 5. | NW_001092714 | AGG | 7 | 8943 | 8963 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85111996 |
| 6. | NW_001092714 | CCT | 4 | 9182 | 9193 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111996 |
| 7. | NW_001092714 | CGC | 4 | 10942 | 10952 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85111998 |
| 8. | NW_001092714 | GGA | 4 | 11703 | 11714 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111998 |
| 9. | NW_001092714 | GTA | 4 | 12502 | 12513 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112000 |
| 10. | NW_001092714 | TTC | 4 | 12818 | 12829 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85112000 |
| 11. | NW_001092714 | TCA | 7 | 12846 | 12866 | 21 | 33.33% | 33.33% | 0.00% | 33.33% | 85112000 |
| 12. | NW_001092714 | AAC | 4 | 13759 | 13769 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 13. | NW_001092714 | TAC | 4 | 13877 | 13888 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001092714 | AGA | 4 | 14215 | 14227 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092714 | GAA | 4 | 15734 | 15745 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85112004 |
| 16. | NW_001092714 | CCA | 4 | 16788 | 16800 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 17. | NW_001092714 | GAT | 4 | 22699 | 22710 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112010 |
| 18. | NW_001092714 | TAC | 4 | 25617 | 25628 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85112012 |
| 19. | NW_001092714 | GCA | 4 | 26737 | 26747 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85112014 |
| 20. | NW_001092714 | TGG | 4 | 27761 | 27772 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85112014 |
| 21. | NW_001092714 | GTG | 4 | 28581 | 28592 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85112014 |
| 22. | NW_001092714 | AAG | 4 | 33252 | 33263 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85112016 |
| 23. | NW_001092714 | TGA | 4 | 34415 | 34425 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 24. | NW_001092714 | TGG | 4 | 35553 | 35563 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 25. | NW_001092714 | TCC | 18 | 38303 | 38356 | 54 | 0.00% | 33.33% | 0.00% | 66.67% | 85112018 |
| 26. | NW_001092714 | GTG | 4 | 38742 | 38754 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 27. | NW_001092714 | GTG | 4 | 42411 | 42422 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092714 | AGA | 4 | 42738 | 42748 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092714 | TCC | 4 | 44912 | 44923 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85112022 |
| 30. | NW_001092714 | TGA | 4 | 45114 | 45125 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85112022 |
| 31. | NW_001092714 | GAC | 4 | 46972 | 46984 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 85112022 |
| 32. | NW_001092714 | CAC | 4 | 48798 | 48809 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 33. | NW_001092714 | CAA | 4 | 48930 | 48941 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092714 | CAG | 8 | 48948 | 48970 | 23 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 35. | NW_001092714 | ACG | 4 | 51015 | 51026 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 36. | NW_001092714 | GAA | 4 | 51992 | 52004 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 37. | NW_001092714 | ATC | 4 | 55134 | 55145 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092714 | CGT | 4 | 55875 | 55887 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 39. | NW_001092714 | AAG | 6 | 61024 | 61044 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | 85112028 |
| 40. | NW_001092714 | CAG | 4 | 63766 | 63777 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112030 |
| 41. | NW_001092714 | AAG | 4 | 64152 | 64162 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092714 | TGC | 4 | 64332 | 64343 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 43. | NW_001092714 | CGT | 4 | 66332 | 66343 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85112032 |
| 44. | NW_001092714 | GAC | 4 | 66542 | 66553 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85112032 |
| 45. | NW_001092714 | AGC | 5 | 66927 | 66940 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |