List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092712 | CTT | 4 | 413 | 424 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092712 | GCA | 4 | 2843 | 2854 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111910 |
| 3. | NW_001092712 | ACA | 4 | 3041 | 3052 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111910 |
| 4. | NW_001092712 | AGA | 5 | 4171 | 4185 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092712 | TCG | 4 | 4657 | 4668 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 6. | NW_001092712 | TCA | 4 | 4666 | 4677 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092712 | ACG | 4 | 5287 | 5297 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 8. | NW_001092712 | GTA | 8 | 5641 | 5662 | 22 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092712 | TCA | 4 | 7426 | 7437 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092712 | CTT | 4 | 10396 | 10407 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111912 |
| 11. | NW_001092712 | TCT | 4 | 10581 | 10591 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85111912 |
| 12. | NW_001092712 | ACA | 4 | 14789 | 14801 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 13. | NW_001092712 | AGA | 4 | 17794 | 17805 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111914 |
| 14. | NW_001092712 | AAC | 4 | 17895 | 17906 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111914 |
| 15. | NW_001092712 | GTT | 4 | 18068 | 18079 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85111914 |
| 16. | NW_001092712 | GCG | 4 | 18171 | 18182 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111914 |
| 17. | NW_001092712 | TCC | 5 | 18795 | 18809 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85111916 |
| 18. | NW_001092712 | TCT | 4 | 18906 | 18917 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111916 |
| 19. | NW_001092712 | TGA | 4 | 18935 | 18946 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111916 |
| 20. | NW_001092712 | GTC | 5 | 19058 | 19072 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111916 |
| 21. | NW_001092712 | GCC | 4 | 19115 | 19126 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111916 |
| 22. | NW_001092712 | AGG | 4 | 19356 | 19368 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85111916 |
| 23. | NW_001092712 | TCC | 4 | 19621 | 19632 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111916 |
| 24. | NW_001092712 | CTC | 4 | 19867 | 19881 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85111916 |
| 25. | NW_001092712 | TCC | 4 | 19907 | 19918 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111916 |
| 26. | NW_001092712 | TGC | 8 | 19916 | 19939 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85111916 |
| 27. | NW_001092712 | GGC | 4 | 20039 | 20050 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111916 |
| 28. | NW_001092712 | TCT | 4 | 21619 | 21629 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85111918 |
| 29. | NW_001092712 | TGT | 4 | 21809 | 21820 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85111918 |
| 30. | NW_001092712 | GTT | 10 | 21810 | 21839 | 30 | 0.00% | 66.67% | 33.33% | 0.00% | 85111918 |
| 31. | NW_001092712 | TGC | 5 | 21860 | 21874 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111918 |
| 32. | NW_001092712 | GAT | 4 | 22488 | 22499 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111918 |
| 33. | NW_001092712 | AGA | 4 | 24413 | 24423 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 34. | NW_001092712 | ATG | 4 | 24584 | 24594 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 35. | NW_001092712 | CGA | 4 | 26000 | 26011 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 36. | NW_001092712 | GCT | 4 | 26196 | 26206 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092712 | TCA | 4 | 27849 | 27860 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092712 | TCT | 4 | 31730 | 31741 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092712 | ACC | 4 | 32198 | 32209 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111924 |
| 40. | NW_001092712 | AAC | 4 | 34466 | 34478 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 41. | NW_001092712 | TCT | 6 | 35028 | 35044 | 17 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001092712 | ACA | 7 | 35064 | 35084 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001092712 | ACA | 4 | 35354 | 35365 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111926 |
| 44. | NW_001092712 | CGC | 4 | 35395 | 35406 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111926 |
| 45. | NW_001092712 | TGT | 4 | 36051 | 36061 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 46. | NW_001092712 | AGC | 5 | 36212 | 36226 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 47. | NW_001092712 | AAC | 5 | 36224 | 36238 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 48. | NW_001092712 | CGG | 4 | 38177 | 38188 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111928 |
| 49. | NW_001092712 | GGA | 4 | 38439 | 38449 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85111928 |
| 50. | NW_001092712 | GCT | 4 | 39895 | 39906 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111928 |
| 51. | NW_001092712 | TGG | 4 | 40747 | 40758 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111928 |
| 52. | NW_001092712 | GAA | 4 | 41494 | 41505 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092712 | AAC | 4 | 45053 | 45064 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 54. | NW_001092712 | GGC | 4 | 45457 | 45468 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111932 |
| 55. | NW_001092712 | CGA | 5 | 45552 | 45566 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85111932 |
| 56. | NW_001092712 | ATC | 4 | 47084 | 47094 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 57. | NW_001092712 | GAA | 4 | 47208 | 47219 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 58. | NW_001092712 | CCA | 4 | 47317 | 47328 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 59. | NW_001092712 | GCT | 4 | 47526 | 47537 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 60. | NW_001092712 | AAC | 4 | 48548 | 48558 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 61. | NW_001092712 | TCC | 4 | 49049 | 49060 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111934 |
| 62. | NW_001092712 | GTC | 4 | 50517 | 50528 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 63. | NW_001092712 | TGG | 5 | 50889 | 50902 | 14 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 64. | NW_001092712 | GCA | 4 | 51892 | 51903 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 65. | NW_001092712 | CTC | 4 | 53385 | 53396 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 66. | NW_001092712 | TCC | 4 | 53567 | 53578 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111936 |
| 67. | NW_001092712 | TGC | 4 | 53892 | 53903 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111936 |
| 68. | NW_001092712 | CTT | 4 | 54190 | 54201 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111936 |
| 69. | NW_001092712 | CTT | 4 | 54205 | 54216 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111936 |
| 70. | NW_001092712 | TCG | 4 | 54332 | 54343 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111936 |
| 71. | NW_001092712 | TCT | 4 | 58498 | 58509 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 72. | NW_001092712 | CCG | 4 | 63408 | 63419 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111944 |
| 73. | NW_001092712 | AGA | 5 | 65040 | 65053 | 14 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 74. | NW_001092712 | GGC | 5 | 66292 | 66306 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |