List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092712 | TATT | 3 | 3895 | 3905 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092712 | GGAA | 3 | 4009 | 4021 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 3. | NW_001092712 | TCGA | 3 | 4396 | 4406 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 4. | NW_001092712 | CAGG | 12 | 5043 | 5090 | 48 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 5. | NW_001092712 | TAGG | 3 | 5183 | 5194 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 6. | NW_001092712 | CAAT | 3 | 5696 | 5707 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NW_001092712 | CCCA | 3 | 7348 | 7358 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 8. | NW_001092712 | TAGG | 3 | 12611 | 12622 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 9. | NW_001092712 | AGGT | 3 | 12932 | 12943 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092712 | AGAA | 3 | 16392 | 16402 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 85111914 |
| 11. | NW_001092712 | TCCC | 4 | 17976 | 17990 | 15 | 0.00% | 25.00% | 0.00% | 75.00% | 85111914 |
| 12. | NW_001092712 | TCCT | 3 | 19091 | 19103 | 13 | 0.00% | 50.00% | 0.00% | 50.00% | 85111916 |
| 13. | NW_001092712 | AGTC | 3 | 19559 | 19570 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85111916 |
| 14. | NW_001092712 | GAAA | 3 | 21172 | 21182 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NW_001092712 | CAGT | 3 | 26383 | 26394 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092712 | TACC | 4 | 28792 | 28807 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 17. | NW_001092712 | TCAT | 3 | 29837 | 29849 | 13 | 25.00% | 50.00% | 0.00% | 25.00% | 85111922 |
| 18. | NW_001092712 | GCCA | 3 | 30620 | 30630 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85111922 |
| 19. | NW_001092712 | TGCC | 3 | 33132 | 33144 | 13 | 0.00% | 25.00% | 25.00% | 50.00% | 85111924 |
| 20. | NW_001092712 | AATG | 3 | 33820 | 33830 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 21. | NW_001092712 | TCTT | 3 | 35573 | 35583 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | 85111926 |
| 22. | NW_001092712 | TGGG | 3 | 36002 | 36014 | 13 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 23. | NW_001092712 | CCAT | 3 | 36369 | 36380 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 24. | NW_001092712 | TGGA | 3 | 37202 | 37213 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001092712 | ATGG | 3 | 37774 | 37784 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 26. | NW_001092712 | AGGG | 3 | 41474 | 41484 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 27. | NW_001092712 | CAGG | 3 | 42934 | 42944 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85111930 |
| 28. | NW_001092712 | TACC | 3 | 44959 | 44970 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 29. | NW_001092712 | TGCC | 8 | 48015 | 48046 | 32 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 30. | NW_001092712 | CCGT | 3 | 49369 | 49380 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 85111934 |
| 31. | NW_001092712 | AAGT | 3 | 50631 | 50641 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 32. | NW_001092712 | TTGA | 4 | 51287 | 51302 | 16 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 33. | NW_001092712 | CATT | 3 | 52478 | 52489 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 34. | NW_001092712 | ATAC | 4 | 53225 | 53240 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NW_001092712 | CGTG | 3 | 54927 | 54937 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 36. | NW_001092712 | TTCC | 3 | 57148 | 57159 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85111938 |
| 37. | NW_001092712 | ACCA | 3 | 59028 | 59040 | 13 | 50.00% | 0.00% | 0.00% | 50.00% | 85111940 |
| 38. | NW_001092712 | TACC | 3 | 62529 | 62540 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 39. | NW_001092712 | CCGT | 3 | 65556 | 65567 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 40. | NW_001092712 | AGCC | 4 | 65739 | 65754 | 16 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 41. | NW_001092712 | ACTC | 3 | 66988 | 67000 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |