List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092710 | TTC | 4 | 195 | 206 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092710 | TAC | 8 | 229 | 251 | 23 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092710 | TAA | 4 | 369 | 380 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092710 | TCC | 5 | 404 | 418 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 5. | NW_001092710 | CAT | 4 | 941 | 952 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111830 |
| 6. | NW_001092710 | ATG | 4 | 1225 | 1236 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111830 |
| 7. | NW_001092710 | TGT | 4 | 1946 | 1958 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | 85111830 |
| 8. | NW_001092710 | CGT | 7 | 2503 | 2524 | 22 | 0.00% | 33.33% | 33.33% | 33.33% | 85111830 |
| 9. | NW_001092710 | ATG | 5 | 4378 | 4393 | 16 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092710 | GTG | 8 | 5724 | 5747 | 24 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 11. | NW_001092710 | ATT | 4 | 6243 | 6255 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092710 | CTT | 4 | 10245 | 10255 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 13. | NW_001092710 | GAC | 4 | 11305 | 11317 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 85111840 |
| 14. | NW_001092710 | GCG | 4 | 12156 | 12167 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111840 |
| 15. | NW_001092710 | AGA | 4 | 13631 | 13642 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111842 |
| 16. | NW_001092710 | CCA | 4 | 13688 | 13699 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111842 |
| 17. | NW_001092710 | TGA | 4 | 15275 | 15286 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092710 | CAT | 4 | 16438 | 16448 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001092710 | GGC | 5 | 16627 | 16641 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 20. | NW_001092710 | TGC | 4 | 19056 | 19067 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111846 |
| 21. | NW_001092710 | GAG | 4 | 20323 | 20335 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85111846 |
| 22. | NW_001092710 | AGC | 4 | 20382 | 20393 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111846 |
| 23. | NW_001092710 | AGG | 6 | 20391 | 20407 | 17 | 33.33% | 0.00% | 66.67% | 0.00% | 85111846 |
| 24. | NW_001092710 | TTC | 8 | 20495 | 20519 | 25 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092710 | CTT | 4 | 21134 | 21145 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092710 | TCG | 4 | 22708 | 22719 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 27. | NW_001092710 | CAC | 5 | 23442 | 23457 | 16 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 28. | NW_001092710 | ATG | 4 | 23883 | 23893 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092710 | CAA | 9 | 26899 | 26925 | 27 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092710 | TCG | 4 | 28802 | 28813 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 31. | NW_001092710 | GCC | 5 | 29053 | 29067 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 32. | NW_001092710 | GCC | 5 | 29086 | 29100 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 33. | NW_001092710 | GGT | 5 | 29455 | 29469 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 34. | NW_001092710 | GCA | 10 | 29640 | 29669 | 30 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 35. | NW_001092710 | AGA | 4 | 29828 | 29839 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092710 | CTC | 8 | 30626 | 30649 | 24 | 0.00% | 33.33% | 0.00% | 66.67% | 85111854 |
| 37. | NW_001092710 | CGT | 4 | 30666 | 30677 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111854 |
| 38. | NW_001092710 | TGG | 4 | 30689 | 30700 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111854 |
| 39. | NW_001092710 | GTC | 6 | 30762 | 30779 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85111854 |
| 40. | NW_001092710 | CAT | 4 | 30839 | 30850 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111854 |
| 41. | NW_001092710 | GCT | 6 | 31398 | 31415 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85111854 |
| 42. | NW_001092710 | GGT | 4 | 31443 | 31454 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111854 |
| 43. | NW_001092710 | GGA | 4 | 31623 | 31633 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85111854 |
| 44. | NW_001092710 | GTC | 4 | 33285 | 33295 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85111856 |
| 45. | NW_001092710 | TCT | 4 | 33521 | 33531 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85111856 |
| 46. | NW_001092710 | TGG | 4 | 34279 | 34290 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111856 |
| 47. | NW_001092710 | ATG | 4 | 35215 | 35225 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092710 | TGG | 6 | 36247 | 36267 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85111860 |
| 49. | NW_001092710 | CCT | 4 | 37837 | 37847 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 50. | NW_001092710 | CAC | 5 | 37862 | 37876 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85111862 |
| 51. | NW_001092710 | ACT | 5 | 38152 | 38166 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85111862 |
| 52. | NW_001092710 | TAT | 7 | 38166 | 38186 | 21 | 33.33% | 66.67% | 0.00% | 0.00% | 85111862 |
| 53. | NW_001092710 | GGT | 4 | 38848 | 38859 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111862 |
| 54. | NW_001092710 | GTG | 4 | 39820 | 39830 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 55. | NW_001092710 | CAT | 4 | 40929 | 40940 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 56. | NW_001092710 | CAC | 4 | 40950 | 40961 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 57. | NW_001092710 | CAC | 4 | 40965 | 40976 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 58. | NW_001092710 | ACC | 4 | 40983 | 40994 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 59. | NW_001092710 | TGG | 4 | 42753 | 42764 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111866 |
| 60. | NW_001092710 | TGC | 9 | 46608 | 46634 | 27 | 0.00% | 33.33% | 33.33% | 33.33% | 85111868 |
| 61. | NW_001092710 | TGG | 4 | 47244 | 47254 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85111868 |
| 62. | NW_001092710 | TGC | 8 | 47268 | 47291 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85111868 |
| 63. | NW_001092710 | TGA | 4 | 47292 | 47305 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | 85111868 |
| 64. | NW_001092710 | TGC | 4 | 47352 | 47363 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111868 |
| 65. | NW_001092710 | TGT | 12 | 47439 | 47474 | 36 | 0.00% | 66.67% | 33.33% | 0.00% | 85111868 |
| 66. | NW_001092710 | GTT | 11 | 47473 | 47505 | 33 | 0.00% | 66.67% | 33.33% | 0.00% | 85111868 |
| 67. | NW_001092710 | GCT | 7 | 47503 | 47523 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85111868 |
| 68. | NW_001092710 | CTG | 5 | 47576 | 47590 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111868 |
| 69. | NW_001092710 | CAA | 4 | 50866 | 50877 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 70. | NW_001092710 | CAC | 4 | 51430 | 51441 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 71. | NW_001092710 | ACG | 4 | 51784 | 51794 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 72. | NW_001092710 | TCC | 4 | 53168 | 53179 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 73. | NW_001092710 | GAG | 4 | 53733 | 53744 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111870 |
| 74. | NW_001092710 | GAG | 5 | 53763 | 53777 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85111870 |
| 75. | NW_001092710 | TTG | 4 | 55509 | 55520 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 76. | NW_001092710 | GAC | 4 | 56943 | 56954 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 77. | NW_001092710 | CTC | 4 | 57179 | 57189 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85111872 |
| 78. | NW_001092710 | GAG | 4 | 60534 | 60544 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85111874 |
| 79. | NW_001092710 | GTG | 4 | 62393 | 62404 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111876 |
| 80. | NW_001092710 | GAT | 6 | 64181 | 64198 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | 85111876 |
| 81. | NW_001092710 | TTA | 4 | 65309 | 65320 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 82. | NW_001092710 | TAT | 4 | 65394 | 65404 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |