List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092710 | TACC | 3 | 111 | 122 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 2. | NW_001092710 | GAAT | 3 | 181 | 192 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 3. | NW_001092710 | AAAG | 3 | 1522 | 1533 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 85111830 |
| 4. | NW_001092710 | GAAA | 6 | 1542 | 1565 | 24 | 75.00% | 0.00% | 25.00% | 0.00% | 85111830 |
| 5. | NW_001092710 | CCAG | 3 | 2869 | 2880 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 6. | NW_001092710 | GCGG | 4 | 5514 | 5529 | 16 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 7. | NW_001092710 | CTGC | 3 | 5879 | 5891 | 13 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 8. | NW_001092710 | AGAC | 3 | 6630 | 6641 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 9. | NW_001092710 | AAGG | 4 | 8864 | 8879 | 16 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092710 | CTTA | 3 | 10438 | 10448 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 11. | NW_001092710 | CTGT | 3 | 10671 | 10682 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001092710 | AGGT | 3 | 11763 | 11774 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85111840 |
| 13. | NW_001092710 | TCCA | 4 | 13262 | 13277 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 14. | NW_001092710 | TGGT | 3 | 15816 | 15827 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 15. | NW_001092710 | CGCA | 8 | 16216 | 16247 | 32 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 16. | NW_001092710 | GTTC | 3 | 17493 | 17505 | 13 | 0.00% | 50.00% | 25.00% | 25.00% | 85111844 |
| 17. | NW_001092710 | GAAC | 3 | 17909 | 17920 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | 85111844 |
| 18. | NW_001092710 | GGTT | 5 | 20549 | 20568 | 20 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 19. | NW_001092710 | TACC | 6 | 21290 | 21317 | 28 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 20. | NW_001092710 | TAGG | 6 | 21512 | 21535 | 24 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 21. | NW_001092710 | TACC | 3 | 21725 | 21736 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092710 | ACAA | 3 | 21747 | 21758 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NW_001092710 | GTAT | 4 | 22396 | 22411 | 16 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 24. | NW_001092710 | GACT | 3 | 22464 | 22476 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 25. | NW_001092710 | TAAC | 5 | 22581 | 22600 | 20 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 26. | NW_001092710 | TATC | 3 | 22675 | 22686 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 27. | NW_001092710 | GAAA | 3 | 22729 | 22739 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NW_001092710 | TAAA | 3 | 23194 | 23205 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092710 | CACC | 3 | 23410 | 23421 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 30. | NW_001092710 | TACC | 3 | 25054 | 25065 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85111850 |
| 31. | NW_001092710 | CCTT | 3 | 25657 | 25667 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 32. | NW_001092710 | CTAC | 3 | 26238 | 26248 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 33. | NW_001092710 | AAAC | 3 | 26782 | 26793 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 34. | NW_001092710 | CCAT | 4 | 30327 | 30342 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092710 | TGGG | 3 | 32009 | 32019 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | 85111854 |
| 36. | NW_001092710 | GCGG | 3 | 32479 | 32490 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | 85111854 |
| 37. | NW_001092710 | TCGG | 4 | 33707 | 33722 | 16 | 0.00% | 25.00% | 50.00% | 25.00% | 85111856 |
| 38. | NW_001092710 | CTCG | 3 | 37466 | 37478 | 13 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 39. | NW_001092710 | TCCA | 3 | 37967 | 37979 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 85111862 |
| 40. | NW_001092710 | TTCC | 3 | 39480 | 39491 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85111864 |
| 41. | NW_001092710 | GAAA | 3 | 40765 | 40775 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 42. | NW_001092710 | TATG | 3 | 40805 | 40816 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 43. | NW_001092710 | CCTA | 4 | 41141 | 41156 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 44. | NW_001092710 | TGAG | 3 | 41431 | 41442 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 45. | NW_001092710 | CTTA | 3 | 41546 | 41556 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 46. | NW_001092710 | GGTT | 3 | 43942 | 43953 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 47. | NW_001092710 | GGGT | 3 | 44361 | 44372 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 48. | NW_001092710 | TACC | 4 | 50888 | 50903 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 49. | NW_001092710 | AAGG | 4 | 54478 | 54493 | 16 | 50.00% | 0.00% | 50.00% | 0.00% | 85111870 |
| 50. | NW_001092710 | GGGA | 3 | 54537 | 54547 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | 85111870 |
| 51. | NW_001092710 | CAAG | 3 | 56295 | 56305 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 52. | NW_001092710 | CGAA | 3 | 56601 | 56612 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 53. | NW_001092710 | TGCA | 3 | 58225 | 58235 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 54. | NW_001092710 | CCCA | 3 | 58818 | 58829 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 55. | NW_001092710 | CCCT | 3 | 62710 | 62720 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | 85111876 |
| 56. | NW_001092710 | TATT | 3 | 65296 | 65307 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092710 | TTTA | 3 | 65479 | 65490 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |