List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092708 | CTC | 4 | 1910 | 1920 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85111768 |
| 2. | NW_001092708 | CGA | 4 | 3053 | 3063 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 3. | NW_001092708 | ACA | 4 | 3255 | 3266 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 4. | NW_001092708 | TCC | 4 | 5461 | 5472 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111770 |
| 5. | NW_001092708 | ACA | 7 | 5589 | 5610 | 22 | 66.67% | 0.00% | 0.00% | 33.33% | 85111770 |
| 6. | NW_001092708 | AGA | 4 | 6031 | 6042 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111770 |
| 7. | NW_001092708 | TCC | 4 | 6464 | 6475 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111770 |
| 8. | NW_001092708 | TCT | 4 | 6810 | 6821 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 9. | NW_001092708 | CGG | 4 | 6825 | 6835 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 10. | NW_001092708 | TTG | 6 | 12498 | 12515 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85111772 |
| 11. | NW_001092708 | GGA | 4 | 12881 | 12891 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 12. | NW_001092708 | ACG | 4 | 14209 | 14220 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111774 |
| 13. | NW_001092708 | CCT | 4 | 18457 | 18468 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111774 |
| 14. | NW_001092708 | GCC | 4 | 18527 | 18538 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111774 |
| 15. | NW_001092708 | TCG | 4 | 18582 | 18593 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111774 |
| 16. | NW_001092708 | TCT | 4 | 20259 | 20270 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092708 | CGC | 4 | 21002 | 21014 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85111776 |
| 18. | NW_001092708 | GCC | 4 | 21015 | 21026 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111776 |
| 19. | NW_001092708 | CGC | 4 | 23174 | 23186 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85111778 |
| 20. | NW_001092708 | AGC | 4 | 23718 | 23728 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85111778 |
| 21. | NW_001092708 | CCT | 4 | 25172 | 25182 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85111780 |
| 22. | NW_001092708 | TCC | 4 | 25222 | 25233 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111780 |
| 23. | NW_001092708 | TCC | 4 | 25317 | 25328 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111780 |
| 24. | NW_001092708 | TGT | 4 | 26112 | 26124 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 25. | NW_001092708 | TCT | 4 | 27566 | 27577 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111782 |
| 26. | NW_001092708 | AGG | 4 | 28609 | 28620 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 27. | NW_001092708 | CCA | 5 | 29689 | 29703 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 28. | NW_001092708 | GGA | 4 | 30180 | 30191 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111784 |
| 29. | NW_001092708 | GAT | 5 | 33625 | 33639 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001092708 | GTC | 4 | 33818 | 33829 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111788 |
| 31. | NW_001092708 | GCT | 4 | 37410 | 37420 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 32. | NW_001092708 | CAC | 5 | 39385 | 39399 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 33. | NW_001092708 | AAG | 4 | 39840 | 39851 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111790 |
| 34. | NW_001092708 | TCC | 7 | 43230 | 43250 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | 85111790 |
| 35. | NW_001092708 | GAT | 5 | 43489 | 43503 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85111790 |
| 36. | NW_001092708 | AGA | 4 | 44153 | 44164 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 37. | NW_001092708 | AGA | 4 | 44257 | 44268 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 38. | NW_001092708 | CAC | 5 | 44557 | 44571 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85111792 |
| 39. | NW_001092708 | CAG | 4 | 44704 | 44715 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111792 |
| 40. | NW_001092708 | GTC | 5 | 44889 | 44903 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111792 |
| 41. | NW_001092708 | GAT | 4 | 44907 | 44917 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85111792 |
| 42. | NW_001092708 | TGG | 4 | 45373 | 45383 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85111792 |
| 43. | NW_001092708 | TCG | 5 | 45447 | 45461 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111792 |
| 44. | NW_001092708 | GTC | 5 | 50157 | 50172 | 16 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 45. | NW_001092708 | TCC | 4 | 51763 | 51773 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85111794 |
| 46. | NW_001092708 | ACA | 4 | 53207 | 53217 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 47. | NW_001092708 | TTG | 5 | 53652 | 53665 | 14 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092708 | GAC | 5 | 53824 | 53838 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001092708 | CCG | 4 | 54018 | 54030 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 50. | NW_001092708 | ACG | 5 | 54712 | 54726 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 51. | NW_001092708 | TGA | 7 | 55273 | 55293 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | 85111796 |
| 52. | NW_001092708 | CAG | 4 | 55458 | 55469 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111796 |
| 53. | NW_001092708 | GTG | 4 | 56555 | 56566 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 54. | NW_001092708 | GTT | 4 | 56561 | 56572 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |