List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092708 | AGCT | 3 | 6071 | 6081 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85111770 |
| 2. | NW_001092708 | GTAA | 3 | 12365 | 12376 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85111772 |
| 3. | NW_001092708 | CCAT | 3 | 12452 | 12462 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85111772 |
| 4. | NW_001092708 | AGCC | 3 | 14912 | 14924 | 13 | 25.00% | 0.00% | 25.00% | 50.00% | 85111774 |
| 5. | NW_001092708 | TCCA | 3 | 20137 | 20148 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 6. | NW_001092708 | CGCC | 6 | 20286 | 20309 | 24 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 7. | NW_001092708 | TCGG | 4 | 25944 | 25959 | 16 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 8. | NW_001092708 | GGGA | 3 | 27589 | 27600 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85111782 |
| 9. | NW_001092708 | CATC | 3 | 29843 | 29853 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85111784 |
| 10. | NW_001092708 | TCCC | 3 | 29927 | 29938 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85111784 |
| 11. | NW_001092708 | TGAG | 3 | 32418 | 32428 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85111786 |
| 12. | NW_001092708 | CTAT | 3 | 33157 | 33168 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 13. | NW_001092708 | CTTC | 3 | 38492 | 38503 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 14. | NW_001092708 | TGTT | 4 | 38696 | 38711 | 16 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NW_001092708 | TCCT | 3 | 39718 | 39729 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85111790 |
| 16. | NW_001092708 | GGCT | 3 | 43135 | 43145 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85111790 |
| 17. | NW_001092708 | GAAG | 3 | 43458 | 43470 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 85111790 |
| 18. | NW_001092708 | AGGT | 3 | 45534 | 45545 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85111792 |
| 19. | NW_001092708 | ATGG | 3 | 50515 | 50525 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 20. | NW_001092708 | TACC | 5 | 50880 | 50899 | 20 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NW_001092708 | TGGA | 3 | 52291 | 52302 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 22. | NW_001092708 | GAGG | 3 | 52861 | 52872 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 23. | NW_001092708 | TTTG | 3 | 53778 | 53789 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 24. | NW_001092708 | ATCC | 5 | 54397 | 54417 | 21 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 25. | NW_001092708 | TGTC | 5 | 54421 | 54440 | 20 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 26. | NW_001092708 | TGTC | 3 | 55031 | 55041 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 27. | NW_001092708 | ACTC | 3 | 55170 | 55181 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 28. | NW_001092708 | GAGC | 3 | 57410 | 57420 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |