List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092702 | GAC | 4 | 93 | 105 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 2. | NW_001092702 | AGT | 8 | 1171 | 1194 | 24 | 33.33% | 33.33% | 33.33% | 0.00% | 85111634 |
| 3. | NW_001092702 | CGC | 4 | 1229 | 1240 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111634 |
| 4. | NW_001092702 | TGC | 5 | 1409 | 1423 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111634 |
| 5. | NW_001092702 | TAG | 5 | 1548 | 1562 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85111634 |
| 6. | NW_001092702 | CTG | 4 | 1742 | 1753 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111634 |
| 7. | NW_001092702 | CAA | 11 | 1769 | 1801 | 33 | 66.67% | 0.00% | 0.00% | 33.33% | 85111634 |
| 8. | NW_001092702 | GAG | 4 | 1967 | 1978 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 9. | NW_001092702 | CAA | 4 | 1990 | 2001 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111634 |
| 10. | NW_001092702 | CCA | 4 | 1996 | 2007 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111634 |
| 11. | NW_001092702 | ACC | 4 | 2013 | 2024 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111634 |
| 12. | NW_001092702 | ACC | 13 | 2028 | 2066 | 39 | 33.33% | 0.00% | 0.00% | 66.67% | 85111634 |
| 13. | NW_001092702 | AGG | 7 | 2241 | 2261 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 14. | NW_001092702 | CAA | 12 | 2410 | 2444 | 35 | 66.67% | 0.00% | 0.00% | 33.33% | 85111634 |
| 15. | NW_001092702 | CAG | 5 | 2476 | 2490 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85111634 |
| 16. | NW_001092702 | TGA | 4 | 3069 | 3080 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111634 |
| 17. | NW_001092702 | GAG | 4 | 3082 | 3093 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 18. | NW_001092702 | AGG | 8 | 4283 | 4306 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 19. | NW_001092702 | CCA | 7 | 4757 | 4777 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85111634 |
| 20. | NW_001092702 | ACA | 4 | 4775 | 4787 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | 85111634 |
| 21. | NW_001092702 | CAA | 4 | 6782 | 6793 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111634 |
| 22. | NW_001092702 | GAT | 4 | 7456 | 7467 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111634 |
| 23. | NW_001092702 | GAG | 8 | 7509 | 7531 | 23 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 24. | NW_001092702 | TGA | 4 | 7557 | 7568 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111634 |
| 25. | NW_001092702 | AAG | 5 | 7685 | 7699 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85111634 |
| 26. | NW_001092702 | GAT | 7 | 7774 | 7794 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | 85111634 |
| 27. | NW_001092702 | TGG | 5 | 8043 | 8057 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85111634 |
| 28. | NW_001092702 | AGG | 4 | 8058 | 8069 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 29. | NW_001092702 | GGA | 5 | 8251 | 8265 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85111634 |
| 30. | NW_001092702 | GAG | 4 | 8339 | 8350 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 31. | NW_001092702 | AAG | 4 | 8345 | 8356 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092702 | TCG | 4 | 10593 | 10603 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85111636 |
| 33. | NW_001092702 | TGT | 4 | 12300 | 12310 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 34. | NW_001092702 | TGG | 4 | 13454 | 13464 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 35. | NW_001092702 | CTG | 5 | 15630 | 15644 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111638 |
| 36. | NW_001092702 | CTG | 4 | 15651 | 15662 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111638 |
| 37. | NW_001092702 | CTG | 4 | 15666 | 15677 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111638 |
| 38. | NW_001092702 | ACG | 4 | 15973 | 15984 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111638 |
| 39. | NW_001092702 | TAC | 4 | 16199 | 16210 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111638 |
| 40. | NW_001092702 | CTA | 4 | 16249 | 16260 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111638 |
| 41. | NW_001092702 | CCT | 12 | 16318 | 16353 | 36 | 0.00% | 33.33% | 0.00% | 66.67% | 85111638 |
| 42. | NW_001092702 | CAT | 4 | 16645 | 16656 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111638 |
| 43. | NW_001092702 | CAA | 4 | 16785 | 16796 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111638 |
| 44. | NW_001092702 | GCC | 4 | 16973 | 16984 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111638 |
| 45. | NW_001092702 | GGA | 4 | 17657 | 17667 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85111638 |
| 46. | NW_001092702 | CAA | 14 | 20625 | 20666 | 42 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 47. | NW_001092702 | CAT | 8 | 20658 | 20683 | 26 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 48. | NW_001092702 | GAC | 4 | 20835 | 20846 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001092702 | TCT | 4 | 20998 | 21009 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 50. | NW_001092702 | CTT | 4 | 22449 | 22460 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 51. | NW_001092702 | CTT | 4 | 25187 | 25197 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 52. | NW_001092702 | AAC | 4 | 25641 | 25652 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 53. | NW_001092702 | CAA | 4 | 26019 | 26030 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111642 |
| 54. | NW_001092702 | TCT | 5 | 26201 | 26215 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85111642 |
| 55. | NW_001092702 | ACG | 5 | 26302 | 26316 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 56. | NW_001092702 | AAC | 4 | 26362 | 26373 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 57. | NW_001092702 | TAC | 4 | 27434 | 27444 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 58. | NW_001092702 | CTT | 4 | 27542 | 27553 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 59. | NW_001092702 | ACG | 5 | 28750 | 28764 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85111644 |
| 60. | NW_001092702 | AGC | 4 | 31054 | 31065 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111644 |
| 61. | NW_001092702 | GAA | 5 | 31230 | 31244 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85111644 |
| 62. | NW_001092702 | GAT | 7 | 31236 | 31256 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | 85111644 |
| 63. | NW_001092702 | AAG | 5 | 33208 | 33222 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85111644 |
| 64. | NW_001092702 | GAC | 4 | 33237 | 33247 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85111644 |
| 65. | NW_001092702 | CTG | 4 | 34516 | 34526 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85111646 |
| 66. | NW_001092702 | TGT | 4 | 35667 | 35678 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85111646 |
| 67. | NW_001092702 | CTC | 8 | 35872 | 35895 | 24 | 0.00% | 33.33% | 0.00% | 66.67% | 85111646 |
| 68. | NW_001092702 | TCC | 11 | 35927 | 35959 | 33 | 0.00% | 33.33% | 0.00% | 66.67% | 85111646 |
| 69. | NW_001092702 | AGG | 4 | 36808 | 36819 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111646 |
| 70. | NW_001092702 | AGC | 4 | 37168 | 37179 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111646 |
| 71. | NW_001092702 | CGC | 4 | 38757 | 38769 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85111646 |
| 72. | NW_001092702 | AAG | 4 | 39469 | 39480 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 73. | NW_001092702 | CGG | 4 | 39503 | 39514 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 74. | NW_001092702 | TCG | 4 | 40634 | 40645 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111648 |
| 75. | NW_001092702 | TTC | 4 | 42006 | 42018 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 76. | NW_001092702 | AGA | 4 | 42656 | 42667 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 77. | NW_001092702 | GAA | 4 | 42679 | 42690 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 78. | NW_001092702 | AAC | 4 | 42927 | 42938 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 79. | NW_001092702 | TGC | 4 | 44815 | 44826 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111650 |
| 80. | NW_001092702 | GAG | 7 | 46446 | 46466 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 81. | NW_001092702 | TGG | 4 | 46488 | 46499 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 82. | NW_001092702 | GTC | 5 | 47460 | 47475 | 16 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |