List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092700 | ATC | 4 | 1477 | 1488 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092700 | AGT | 4 | 1569 | 1580 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092700 | AGT | 4 | 1592 | 1603 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092700 | TGG | 5 | 8780 | 8794 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85111588 |
| 5. | NW_001092700 | CAA | 4 | 9739 | 9750 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001092700 | TCA | 9 | 10375 | 10401 | 27 | 33.33% | 33.33% | 0.00% | 33.33% | 85111590 |
| 7. | NW_001092700 | ACA | 5 | 10393 | 10407 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85111590 |
| 8. | NW_001092700 | CGT | 4 | 10469 | 10480 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111590 |
| 9. | NW_001092700 | CGC | 4 | 10742 | 10754 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85111590 |
| 10. | NW_001092700 | GCC | 4 | 10872 | 10883 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111590 |
| 11. | NW_001092700 | TGT | 11 | 10964 | 10996 | 33 | 0.00% | 66.67% | 33.33% | 0.00% | 85111590 |
| 12. | NW_001092700 | TGC | 9 | 11077 | 11102 | 26 | 0.00% | 33.33% | 33.33% | 33.33% | 85111590 |
| 13. | NW_001092700 | GGC | 4 | 11100 | 11111 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111590 |
| 14. | NW_001092700 | TTC | 4 | 14774 | 14784 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001092700 | TCT | 4 | 14866 | 14877 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111592 |
| 16. | NW_001092700 | TCA | 5 | 15116 | 15129 | 14 | 33.33% | 33.33% | 0.00% | 33.33% | 85111592 |
| 17. | NW_001092700 | AGA | 4 | 16102 | 16112 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85111592 |
| 18. | NW_001092700 | GCC | 4 | 17171 | 17182 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111594 |
| 19. | NW_001092700 | TCG | 4 | 18132 | 18143 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111594 |
| 20. | NW_001092700 | CTT | 4 | 20169 | 20180 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111596 |
| 21. | NW_001092700 | CAC | 4 | 21917 | 21928 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 22. | NW_001092700 | TCT | 7 | 22964 | 22984 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 23. | NW_001092700 | CAC | 5 | 24829 | 24843 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 24. | NW_001092700 | CAA | 6 | 27635 | 27653 | 19 | 66.67% | 0.00% | 0.00% | 33.33% | 85111598 |
| 25. | NW_001092700 | TGA | 4 | 29476 | 29487 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85111598 |
| 26. | NW_001092700 | CCA | 7 | 30382 | 30402 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85111600 |
| 27. | NW_001092700 | GTA | 4 | 30475 | 30485 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85111600 |
| 28. | NW_001092700 | GTT | 5 | 30646 | 30660 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 29. | NW_001092700 | GTG | 5 | 30670 | 30684 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85111600 |
| 30. | NW_001092700 | GTT | 6 | 30824 | 30842 | 19 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 31. | NW_001092700 | GTT | 4 | 30905 | 30916 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 32. | NW_001092700 | GCG | 7 | 30935 | 30955 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | 85111600 |
| 33. | NW_001092700 | TGT | 6 | 31088 | 31105 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 34. | NW_001092700 | GGA | 4 | 31110 | 31121 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85111600 |
| 35. | NW_001092700 | TCC | 5 | 31179 | 31193 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85111600 |
| 36. | NW_001092700 | TCT | 8 | 31211 | 31233 | 23 | 0.00% | 66.67% | 0.00% | 33.33% | 85111600 |
| 37. | NW_001092700 | CTT | 5 | 31244 | 31258 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85111600 |
| 38. | NW_001092700 | TGT | 4 | 31326 | 31337 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 39. | NW_001092700 | TGT | 9 | 31591 | 31617 | 27 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 40. | NW_001092700 | TCT | 4 | 31729 | 31743 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85111600 |
| 41. | NW_001092700 | CCA | 4 | 31801 | 31812 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111600 |
| 42. | NW_001092700 | CAC | 4 | 31827 | 31837 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85111600 |
| 43. | NW_001092700 | GTT | 8 | 31898 | 31921 | 24 | 0.00% | 66.67% | 33.33% | 0.00% | 85111600 |
| 44. | NW_001092700 | GAA | 8 | 35069 | 35092 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 45. | NW_001092700 | CCA | 4 | 35819 | 35831 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 46. | NW_001092700 | CGT | 4 | 36058 | 36069 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 47. | NW_001092700 | AGA | 4 | 37812 | 37823 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111604 |
| 48. | NW_001092700 | CGT | 4 | 37920 | 37931 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111604 |
| 49. | NW_001092700 | TCT | 4 | 37994 | 38005 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111604 |
| 50. | NW_001092700 | TCA | 4 | 39493 | 39504 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111606 |
| 51. | NW_001092700 | CGC | 6 | 39523 | 39540 | 18 | 0.00% | 0.00% | 33.33% | 66.67% | 85111606 |
| 52. | NW_001092700 | CTC | 5 | 39598 | 39612 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85111606 |
| 53. | NW_001092700 | CGG | 4 | 44986 | 44996 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85111610 |
| 54. | NW_001092700 | CTC | 4 | 46451 | 46461 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85111610 |
| 55. | NW_001092700 | TCG | 4 | 46972 | 46983 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111610 |
| 56. | NW_001092700 | AGA | 4 | 47330 | 47344 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |