List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092698 | CAA | 4 | 1706 | 1717 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092698 | TTC | 4 | 2860 | 2872 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092698 | TCT | 4 | 15037 | 15048 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 4. | NW_001092698 | GAT | 5 | 15935 | 15949 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092698 | ACC | 4 | 17228 | 17239 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 6. | NW_001092698 | TTG | 4 | 18989 | 19000 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092698 | TCA | 4 | 19737 | 19749 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092698 | GTT | 11 | 20464 | 20499 | 36 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092698 | TGA | 4 | 20557 | 20567 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092698 | CGG | 4 | 21196 | 21207 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 11. | NW_001092698 | GGC | 4 | 21432 | 21443 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111542 |
| 12. | NW_001092698 | GAT | 4 | 22653 | 22663 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85111542 |
| 13. | NW_001092698 | TCG | 4 | 23145 | 23156 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111542 |
| 14. | NW_001092698 | GCT | 4 | 24146 | 24157 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 15. | NW_001092698 | CAT | 4 | 25168 | 25179 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 16. | NW_001092698 | TGT | 4 | 26553 | 26563 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092698 | GAG | 4 | 27175 | 27185 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 18. | NW_001092698 | CTC | 4 | 27679 | 27690 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111544 |
| 19. | NW_001092698 | GCA | 8 | 27851 | 27874 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 85111544 |
| 20. | NW_001092698 | CAC | 5 | 27911 | 27925 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85111544 |
| 21. | NW_001092698 | CAT | 8 | 27945 | 27968 | 24 | 33.33% | 33.33% | 0.00% | 33.33% | 85111544 |
| 22. | NW_001092698 | CAA | 5 | 27960 | 27974 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85111544 |
| 23. | NW_001092698 | TCC | 9 | 28157 | 28183 | 27 | 0.00% | 33.33% | 0.00% | 66.67% | 85111544 |
| 24. | NW_001092698 | GAG | 4 | 28519 | 28531 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85111544 |
| 25. | NW_001092698 | ATG | 4 | 28706 | 28717 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092698 | AGA | 4 | 28741 | 28752 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092698 | GTG | 7 | 28769 | 28789 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092698 | TGA | 4 | 30451 | 30462 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092698 | TCT | 5 | 30597 | 30610 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | 85111546 |
| 30. | NW_001092698 | CTC | 8 | 30609 | 30631 | 23 | 0.00% | 33.33% | 0.00% | 66.67% | 85111546 |
| 31. | NW_001092698 | GTT | 4 | 30736 | 30747 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85111546 |
| 32. | NW_001092698 | CCT | 4 | 30983 | 30994 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111546 |
| 33. | NW_001092698 | TGA | 4 | 33187 | 33197 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 34. | NW_001092698 | TGG | 5 | 33261 | 33275 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 35. | NW_001092698 | CCG | 5 | 34394 | 34408 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 36. | NW_001092698 | CCA | 4 | 35766 | 35777 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 37. | NW_001092698 | TCG | 4 | 35937 | 35948 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 38. | NW_001092698 | CGT | 4 | 37321 | 37333 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 39. | NW_001092698 | CGG | 4 | 37933 | 37945 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85111548 |
| 40. | NW_001092698 | TCC | 5 | 39143 | 39156 | 14 | 0.00% | 33.33% | 0.00% | 66.67% | 85111550 |
| 41. | NW_001092698 | ACC | 4 | 39261 | 39272 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111550 |
| 42. | NW_001092698 | CTC | 5 | 39288 | 39302 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85111550 |
| 43. | NW_001092698 | TCT | 4 | 40737 | 40748 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092698 | CAT | 4 | 41059 | 41070 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111552 |
| 45. | NW_001092698 | GGT | 4 | 41210 | 41221 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111552 |
| 46. | NW_001092698 | TGC | 4 | 41659 | 41670 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111552 |
| 47. | NW_001092698 | ACC | 8 | 42178 | 42201 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | 85111552 |
| 48. | NW_001092698 | AAG | 4 | 42829 | 42839 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092698 | AGA | 4 | 45225 | 45236 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 50. | NW_001092698 | GAG | 5 | 45307 | 45321 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 51. | NW_001092698 | AAC | 5 | 45352 | 45366 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 52. | NW_001092698 | GAC | 5 | 45367 | 45381 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 53. | NW_001092698 | CGA | 4 | 45492 | 45503 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |