List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092676 | CTT | 4 | 904 | 915 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85111141 |
| 2. | NW_001092676 | CTG | 4 | 1930 | 1942 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | 85111141 |
| 3. | NW_001092676 | GGC | 4 | 3859 | 3870 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111141 |
| 4. | NW_001092676 | ACA | 4 | 4276 | 4288 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 5. | NW_001092676 | CAA | 4 | 6623 | 6633 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85111143 |
| 6. | NW_001092676 | GAA | 4 | 7052 | 7064 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85111143 |
| 7. | NW_001092676 | GAG | 5 | 8883 | 8896 | 14 | 33.33% | 0.00% | 66.67% | 0.00% | 85111143 |
| 8. | NW_001092676 | TGT | 4 | 10020 | 10031 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092676 | CAA | 8 | 12952 | 12975 | 24 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092676 | AAC | 4 | 13095 | 13105 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 11. | NW_001092676 | GAG | 6 | 13178 | 13194 | 17 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 12. | NW_001092676 | AGA | 5 | 13215 | 13229 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092676 | CGA | 4 | 13224 | 13235 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001092676 | ACC | 7 | 13421 | 13442 | 22 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 15. | NW_001092676 | GGT | 5 | 13456 | 13470 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 16. | NW_001092676 | CGC | 4 | 13559 | 13569 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 17. | NW_001092676 | GAT | 4 | 13849 | 13860 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092676 | AGG | 5 | 15402 | 15416 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 19. | NW_001092676 | GAG | 4 | 16323 | 16334 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 20. | NW_001092676 | TGC | 4 | 18915 | 18925 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 21. | NW_001092676 | TCG | 4 | 20021 | 20032 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 22. | NW_001092676 | CAA | 4 | 20147 | 20157 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85111145 |
| 23. | NW_001092676 | ACT | 5 | 20285 | 20298 | 14 | 33.33% | 33.33% | 0.00% | 33.33% | 85111145 |
| 24. | NW_001092676 | CTG | 5 | 21490 | 21504 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111147 |
| 25. | NW_001092676 | GTC | 5 | 21770 | 21784 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 26. | NW_001092676 | TCC | 4 | 22004 | 22014 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001092676 | CAA | 5 | 22283 | 22297 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85111149 |
| 28. | NW_001092676 | ACC | 6 | 22324 | 22341 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | 85111149 |
| 29. | NW_001092676 | CAG | 4 | 22385 | 22396 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111149 |
| 30. | NW_001092676 | CAA | 4 | 22394 | 22405 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111149 |
| 31. | NW_001092676 | AAC | 4 | 22449 | 22460 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85111149 |
| 32. | NW_001092676 | CGA | 4 | 23213 | 23223 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85111149 |
| 33. | NW_001092676 | TCC | 4 | 24450 | 24460 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85111149 |
| 34. | NW_001092676 | CAG | 4 | 25121 | 25132 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111149 |
| 35. | NW_001092676 | AGC | 4 | 25341 | 25352 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85111149 |
| 36. | NW_001092676 | TAT | 4 | 25451 | 25462 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |