List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092623 | AATA | 3 | 73 | 84 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092623 | TGTC | 3 | 464 | 475 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 3. | NW_001092623 | AAGC | 3 | 748 | 758 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 4. | NW_001092623 | AGCG | 6 | 845 | 868 | 24 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 5. | NW_001092623 | GACT | 6 | 881 | 904 | 24 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092623 | GACT | 3 | 1199 | 1210 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 7. | NW_001092623 | CAAA | 3 | 2658 | 2669 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092623 | TATC | 3 | 4736 | 4746 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092623 | GTAC | 3 | 10013 | 10023 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 10. | NW_001092623 | ATGG | 3 | 12441 | 12451 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85110407 |
| 11. | NW_001092623 | CCCG | 3 | 13551 | 13562 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | 85110409 |
| 12. | NW_001092623 | GCGA | 3 | 13979 | 13989 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85110409 |
| 13. | NW_001092623 | CCAG | 3 | 14519 | 14530 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85110409 |
| 14. | NW_001092623 | GACT | 6 | 15880 | 15902 | 23 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 15. | NW_001092623 | CTCG | 3 | 16277 | 16287 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85110411 |
| 16. | NW_001092623 | AAAC | 7 | 19111 | 19138 | 28 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 17. | NW_001092623 | GGGA | 3 | 19907 | 19917 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | 85110415 |
| 18. | NW_001092623 | TCGA | 3 | 20702 | 20712 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 19. | NW_001092623 | CTAC | 3 | 28955 | 28965 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85110417 |
| 20. | NW_001092623 | GCCA | 3 | 32129 | 32139 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85110419 |
| 21. | NW_001092623 | CCTC | 3 | 32278 | 32290 | 13 | 0.00% | 25.00% | 0.00% | 75.00% | 85110419 |
| 22. | NW_001092623 | AGGA | 3 | 33146 | 33158 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 85110419 |
| 23. | NW_001092623 | AGGT | 4 | 34072 | 34087 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 24. | NW_001092623 | GGTA | 3 | 34340 | 34351 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001092623 | GTAT | 3 | 34590 | 34601 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092623 | AACA | 3 | 34653 | 34664 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 27. | NW_001092623 | CTTC | 3 | 34699 | 34710 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 85110421 |
| 28. | NW_001092623 | GTCA | 3 | 38924 | 38935 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85110425 |
| 29. | NW_001092623 | GCTT | 3 | 39773 | 39783 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85110427 |
| 30. | NW_001092623 | GGCA | 3 | 41435 | 41445 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85110429 |
| 31. | NW_001092623 | GCAT | 3 | 42320 | 42331 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 32. | NW_001092623 | CGGT | 3 | 45673 | 45685 | 13 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 33. | NW_001092623 | ATGG | 3 | 46688 | 46699 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 34. | NW_001092623 | AAAC | 3 | 47159 | 47169 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NW_001092623 | CGGT | 3 | 47932 | 47943 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 85110437 |
| 36. | NW_001092623 | GAAA | 3 | 50772 | 50784 | 13 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 37. | NW_001092623 | TTTG | 3 | 52964 | 52974 | 11 | 0.00% | 75.00% | 25.00% | 0.00% | 85110443 |
| 38. | NW_001092623 | GGTT | 3 | 57713 | 57723 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | 85110451 |
| 39. | NW_001092623 | TGGG | 3 | 58867 | 58877 | 11 | 0.00% | 25.00% | 75.00% | 0.00% | 85110451 |
| 40. | NW_001092623 | CAAG | 3 | 62519 | 62529 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 85110453 |
| 41. | NW_001092623 | AGCC | 3 | 63994 | 64004 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85110455 |
| 42. | NW_001092623 | TCTG | 3 | 64840 | 64850 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 43. | NW_001092623 | TCTT | 5 | 66509 | 66528 | 20 | 0.00% | 75.00% | 0.00% | 25.00% | 85110457 |
| 44. | NW_001092623 | CAGC | 3 | 66985 | 66995 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85110457 |
| 45. | NW_001092623 | CCTT | 3 | 68028 | 68040 | 13 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 46. | NW_001092623 | CAAC | 3 | 69814 | 69825 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 85110459 |
| 47. | NW_001092623 | CAGC | 3 | 70002 | 70013 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85110459 |
| 48. | NW_001092623 | GGTT | 3 | 80964 | 80974 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 49. | NW_001092623 | ACTC | 3 | 80977 | 80987 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 50. | NW_001092623 | TCGC | 3 | 82538 | 82549 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 51. | NW_001092623 | AATA | 3 | 83708 | 83719 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NW_001092623 | TCTT | 3 | 84918 | 84930 | 13 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 53. | NW_001092623 | AAAT | 3 | 85006 | 85016 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001092623 | ATTT | 3 | 85878 | 85889 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |