List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092620 | CCT | 4 | 53 | 64 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85110244 |
| 2. | NW_001092620 | AGG | 5 | 5591 | 5605 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85110248 |
| 3. | NW_001092620 | AGG | 4 | 6207 | 6218 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 4. | NW_001092620 | GAT | 4 | 8090 | 8101 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092620 | TGA | 5 | 9063 | 9077 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85110250 |
| 6. | NW_001092620 | TCC | 4 | 10462 | 10472 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 7. | NW_001092620 | GAC | 4 | 12766 | 12777 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85110252 |
| 8. | NW_001092620 | TCC | 4 | 13770 | 13782 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 9. | NW_001092620 | AAT | 4 | 14302 | 14313 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | 85110254 |
| 10. | NW_001092620 | TGT | 4 | 15759 | 15770 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 11. | NW_001092620 | TCT | 4 | 16411 | 16422 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092620 | GTC | 4 | 16499 | 16510 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 13. | NW_001092620 | GAT | 4 | 17786 | 17798 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 14. | NW_001092620 | CTC | 6 | 18253 | 18270 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 85110260 |
| 15. | NW_001092620 | CTG | 4 | 18466 | 18476 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85110260 |
| 16. | NW_001092620 | CGA | 4 | 20185 | 20196 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85110262 |
| 17. | NW_001092620 | CGA | 4 | 20607 | 20618 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85110262 |
| 18. | NW_001092620 | GAG | 4 | 20657 | 20668 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110262 |
| 19. | NW_001092620 | GAG | 4 | 20750 | 20761 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110262 |
| 20. | NW_001092620 | GAG | 4 | 20918 | 20929 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110262 |
| 21. | NW_001092620 | AGG | 4 | 23758 | 23769 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110264 |
| 22. | NW_001092620 | GGA | 4 | 23844 | 23855 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110264 |
| 23. | NW_001092620 | GCG | 4 | 24381 | 24392 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85110264 |
| 24. | NW_001092620 | GAC | 4 | 26281 | 26291 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 25. | NW_001092620 | GTG | 4 | 26370 | 26380 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 26. | NW_001092620 | AGA | 11 | 26405 | 26436 | 32 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092620 | TGC | 5 | 26490 | 26504 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 28. | NW_001092620 | GAG | 4 | 26535 | 26546 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 29. | NW_001092620 | GGC | 4 | 28318 | 28329 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85110266 |
| 30. | NW_001092620 | GTG | 4 | 28376 | 28387 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85110266 |
| 31. | NW_001092620 | TTG | 4 | 29261 | 29272 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85110268 |
| 32. | NW_001092620 | CGA | 4 | 30122 | 30133 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092620 | ACA | 4 | 31354 | 31365 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092620 | CGG | 4 | 39306 | 39317 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85110274 |
| 35. | NW_001092620 | CGA | 4 | 39994 | 40004 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 36. | NW_001092620 | GTT | 4 | 41433 | 41444 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85110276 |
| 37. | NW_001092620 | TGT | 5 | 42187 | 42201 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85110278 |
| 38. | NW_001092620 | CAA | 4 | 43628 | 43639 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092620 | ACG | 4 | 43684 | 43695 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 40. | NW_001092620 | TCA | 4 | 46368 | 46378 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85110284 |
| 41. | NW_001092620 | GAG | 4 | 49365 | 49376 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110286 |
| 42. | NW_001092620 | ACA | 4 | 51033 | 51045 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | 85110290 |
| 43. | NW_001092620 | CGA | 4 | 51124 | 51135 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85110290 |
| 44. | NW_001092620 | ACA | 4 | 51183 | 51194 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85110290 |
| 45. | NW_001092620 | GTT | 4 | 51257 | 51267 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 46. | NW_001092620 | GGC | 4 | 53923 | 53934 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85110294 |
| 47. | NW_001092620 | CGA | 4 | 56425 | 56436 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 48. | NW_001092620 | TGA | 4 | 58044 | 58056 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092620 | CCT | 4 | 59887 | 59898 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85110298 |
| 50. | NW_001092620 | GCA | 4 | 66946 | 66957 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85110304 |
| 51. | NW_001092620 | CGT | 4 | 69940 | 69950 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85110306 |
| 52. | NW_001092620 | TTA | 4 | 70328 | 70339 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092620 | TAG | 4 | 70491 | 70502 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |