List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092613 | ATA | 4 | 183 | 193 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092613 | ATT | 4 | 309 | 319 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092613 | ATT | 5 | 457 | 470 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092613 | ATA | 4 | 513 | 523 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092613 | TAT | 4 | 658 | 668 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092613 | TTA | 4 | 944 | 955 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092613 | TCT | 4 | 1329 | 1340 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092613 | AAT | 4 | 1476 | 1486 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092613 | AAT | 4 | 1810 | 1821 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092613 | TAT | 4 | 1954 | 1965 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092613 | CTT | 4 | 3264 | 3276 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092613 | ATC | 4 | 3537 | 3548 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85110091 |
| 13. | NW_001092613 | ATG | 4 | 6570 | 6580 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 14. | NW_001092613 | CTT | 4 | 7202 | 7214 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | 85110093 |
| 15. | NW_001092613 | GAA | 4 | 9782 | 9793 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85110093 |
| 16. | NW_001092613 | GAC | 4 | 10475 | 10486 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 17. | NW_001092613 | CAT | 5 | 10678 | 10693 | 16 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092613 | CCA | 4 | 11070 | 11080 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85110095 |
| 19. | NW_001092613 | ACA | 4 | 11271 | 11282 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85110095 |
| 20. | NW_001092613 | CAA | 11 | 11429 | 11461 | 33 | 66.67% | 0.00% | 0.00% | 33.33% | 85110095 |
| 21. | NW_001092613 | ACG | 5 | 15561 | 15574 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | 85110097 |
| 22. | NW_001092613 | GAA | 5 | 16627 | 16641 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 23. | NW_001092613 | TGT | 4 | 16990 | 17001 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 24. | NW_001092613 | GAG | 4 | 17604 | 17615 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85110099 |
| 25. | NW_001092613 | AGA | 4 | 18348 | 18358 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85110099 |
| 26. | NW_001092613 | TGT | 4 | 19670 | 19681 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85110099 |
| 27. | NW_001092613 | AGG | 4 | 20164 | 20175 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092613 | ATC | 5 | 21391 | 21405 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 29. | NW_001092613 | ATC | 4 | 21494 | 21504 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092613 | ATG | 4 | 21700 | 21711 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092613 | CAT | 4 | 25832 | 25842 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85110101 |
| 32. | NW_001092613 | TCA | 4 | 30716 | 30727 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85110103 |
| 33. | NW_001092613 | CAA | 4 | 32322 | 32333 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85110103 |
| 34. | NW_001092613 | CAG | 4 | 35180 | 35191 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85110103 |
| 35. | NW_001092613 | GAA | 4 | 36456 | 36467 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092613 | TTC | 4 | 37131 | 37142 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001092613 | AAC | 11 | 40024 | 40057 | 34 | 66.67% | 0.00% | 0.00% | 33.33% | 85110105 |
| 38. | NW_001092613 | AGT | 5 | 41643 | 41657 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092613 | TAT | 4 | 41890 | 41902 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092613 | TAT | 4 | 41968 | 41979 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092613 | ATA | 4 | 42426 | 42437 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 42. | NW_001092613 | ATA | 5 | 42625 | 42638 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001092613 | GCC | 4 | 42768 | 42779 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 44. | NW_001092613 | TAA | 6 | 42808 | 42825 | 18 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 45. | NW_001092613 | AGA | 4 | 42883 | 42894 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 46. | NW_001092613 | AGG | 5 | 42949 | 42963 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 47. | NW_001092613 | TAT | 4 | 44055 | 44065 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092613 | TAT | 4 | 44807 | 44818 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 49. | NW_001092613 | ATA | 4 | 45021 | 45031 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092613 | TTA | 4 | 45157 | 45168 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001092613 | CTA | 4 | 45534 | 45545 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 52. | NW_001092613 | GAA | 4 | 45785 | 45795 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092613 | ATA | 4 | 45802 | 45813 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001092613 | AAG | 4 | 46564 | 46575 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 55. | NW_001092613 | TAA | 8 | 48285 | 48308 | 24 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 56. | NW_001092613 | AGA | 4 | 48531 | 48541 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 57. | NW_001092613 | AGA | 6 | 48591 | 48608 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 58. | NW_001092613 | CGA | 4 | 48681 | 48692 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 59. | NW_001092613 | ATA | 4 | 48791 | 48802 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092613 | ATA | 4 | 48806 | 48816 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092613 | TAA | 12 | 49425 | 49460 | 36 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001092613 | TAA | 4 | 49530 | 49541 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092613 | ATA | 4 | 49679 | 49690 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |