List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092607 | CAC | 4 | 798 | 808 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 2. | NW_001092607 | ATG | 8 | 1049 | 1071 | 23 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092607 | AAT | 4 | 1757 | 1768 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092607 | TCT | 4 | 1833 | 1845 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 5. | NW_001092607 | CAA | 4 | 2180 | 2191 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 6. | NW_001092607 | GCT | 8 | 2361 | 2384 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 7. | NW_001092607 | GGT | 9 | 2379 | 2405 | 27 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 8. | NW_001092607 | GAA | 7 | 2552 | 2572 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092607 | GGC | 5 | 3167 | 3181 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85109945 |
| 10. | NW_001092607 | AGC | 4 | 3247 | 3258 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109945 |
| 11. | NW_001092607 | TGC | 4 | 4923 | 4934 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109945 |
| 12. | NW_001092607 | ACG | 4 | 5105 | 5115 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 13. | NW_001092607 | GTG | 5 | 6197 | 6211 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 14. | NW_001092607 | GTT | 4 | 6209 | 6220 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092607 | CTT | 4 | 8500 | 8511 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109949 |
| 16. | NW_001092607 | TCT | 7 | 8937 | 8957 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 85109949 |
| 17. | NW_001092607 | TGA | 6 | 12381 | 12398 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092607 | AAC | 4 | 12803 | 12813 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001092607 | CCA | 4 | 16143 | 16154 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109955 |
| 20. | NW_001092607 | CGT | 4 | 16189 | 16203 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85109955 |
| 21. | NW_001092607 | GTA | 5 | 18557 | 18571 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 22. | NW_001092607 | GTG | 4 | 18871 | 18883 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092607 | CGG | 4 | 19069 | 19080 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 24. | NW_001092607 | ATC | 5 | 20221 | 20235 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092607 | AAG | 4 | 20615 | 20626 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85109957 |
| 26. | NW_001092607 | AGA | 5 | 20634 | 20648 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85109957 |
| 27. | NW_001092607 | GAG | 8 | 20699 | 20722 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | 85109957 |
| 28. | NW_001092607 | AGG | 4 | 21456 | 21467 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109957 |
| 29. | NW_001092607 | GAG | 4 | 21473 | 21484 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109957 |
| 30. | NW_001092607 | GAA | 4 | 22490 | 22500 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092607 | TAA | 4 | 23583 | 23594 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092607 | CTA | 4 | 23982 | 23992 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001092607 | TAA | 4 | 24283 | 24293 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092607 | TAG | 4 | 24450 | 24461 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |