List of
Perfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092592 | GGAC | 4 | 5085 | 5100 | 16 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 2. | NW_001092592 | TTGT | 3 | 6352 | 6363 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 3. | NW_001092592 | ATTC | 3 | 7457 | 7468 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 4. | NW_001092592 | CCTA | 7 | 8087 | 8114 | 28 | 25.00% | 25.00% | 0.00% | 50.00% | 85109701 |
| 5. | NW_001092592 | TACC | 3 | 8617 | 8628 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85109701 |
| 6. | NW_001092592 | GGTA | 3 | 11188 | 11199 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 7. | NW_001092592 | ATGG | 4 | 11210 | 11225 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 8. | NW_001092592 | CATC | 4 | 14382 | 14397 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 9. | NW_001092592 | CTAC | 6 | 16136 | 16159 | 24 | 25.00% | 25.00% | 0.00% | 50.00% | 85109705 |
| 10. | NW_001092592 | GCAA | 5 | 16708 | 16727 | 20 | 50.00% | 0.00% | 25.00% | 25.00% | 85109705 |
| 11. | NW_001092592 | AGTG | 3 | 21096 | 21107 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 12. | NW_001092592 | GAAA | 3 | 23403 | 23414 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 13. | NW_001092592 | AGTG | 3 | 26211 | 26222 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 14. | NW_001092592 | TCCA | 3 | 31285 | 31296 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 15. | NW_001092592 | CATC | 3 | 31349 | 31360 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 16. | NW_001092592 | TACC | 3 | 31477 | 31488 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 17. | NW_001092592 | CCCT | 3 | 31648 | 31659 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85109711 |
| 18. | NW_001092592 | CCTG | 6 | 37047 | 37070 | 24 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 19. | NW_001092592 | CAGT | 3 | 37174 | 37185 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 20. | NW_001092592 | TCTT | 3 | 41975 | 41986 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 85109719 |
| 21. | NW_001092592 | CTTT | 3 | 46531 | 46542 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 22. | NW_001092592 | GAAA | 3 | 50186 | 50197 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 23. | NW_001092592 | AACG | 4 | 50526 | 50541 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 24. | NW_001092592 | TGTA | 3 | 50932 | 50943 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NW_001092592 | TTAG | 3 | 65771 | 65782 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092592 | GGAT | 5 | 65938 | 65957 | 20 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092592 | AGGG | 3 | 74182 | 74193 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85109733 |
| 28. | NW_001092592 | CCTA | 3 | 75427 | 75438 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 29. | NW_001092592 | TTCG | 16 | 75605 | 75668 | 64 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 30. | NW_001092592 | CTTC | 3 | 76282 | 76293 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NW_001092592 | CAAC | 3 | 76408 | 76419 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 32. | NW_001092592 | TTTC | 3 | 77034 | 77045 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 33. | NW_001092592 | GTAG | 4 | 77410 | 77425 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 34. | NW_001092592 | CATT | 3 | 77848 | 77859 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 35. | NW_001092592 | TGCG | 6 | 77935 | 77958 | 24 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 36. | NW_001092592 | TAAT | 3 | 82411 | 82422 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092592 | CCCT | 3 | 83901 | 83912 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 38. | NW_001092592 | TGGC | 6 | 86775 | 86798 | 24 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 39. | NW_001092592 | GTAT | 3 | 87211 | 87222 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85109741 |
| 40. | NW_001092592 | ACCC | 3 | 87447 | 87458 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | 85109741 |
| 41. | NW_001092592 | TACC | 3 | 87920 | 87931 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85109741 |
| 42. | NW_001092592 | GCTG | 6 | 89484 | 89507 | 24 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 43. | NW_001092592 | TAGG | 4 | 89788 | 89803 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 44. | NW_001092592 | CCAT | 5 | 90022 | 90041 | 20 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 45. | NW_001092592 | TACC | 3 | 90153 | 90164 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 46. | NW_001092592 | TAGG | 3 | 90440 | 90451 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 47. | NW_001092592 | CATG | 4 | 90455 | 90470 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 48. | NW_001092592 | TACC | 3 | 91405 | 91416 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 49. | NW_001092592 | GGTA | 3 | 91842 | 91853 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 50. | NW_001092592 | TAGG | 3 | 91971 | 91982 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 51. | NW_001092592 | CTCC | 4 | 102404 | 102419 | 16 | 0.00% | 25.00% | 0.00% | 75.00% | 85109749 |