List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092590 | ACA | 5 | 414 | 428 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092590 | GTT | 9 | 696 | 722 | 27 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092590 | ACA | 5 | 2344 | 2358 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85109631 |
| 4. | NW_001092590 | GTC | 14 | 2876 | 2916 | 41 | 0.00% | 33.33% | 33.33% | 33.33% | 85109631 |
| 5. | NW_001092590 | TGC | 4 | 3758 | 3768 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 6. | NW_001092590 | TCA | 4 | 3851 | 3862 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092590 | CAT | 4 | 6571 | 6581 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092590 | ACA | 4 | 10266 | 10276 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 9. | NW_001092590 | AAC | 4 | 10326 | 10336 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092590 | TCC | 4 | 11900 | 11911 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109637 |
| 11. | NW_001092590 | TCA | 4 | 17143 | 17154 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092590 | ACC | 4 | 17507 | 17518 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 13. | NW_001092590 | AAC | 4 | 20668 | 20679 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109641 |
| 14. | NW_001092590 | GGA | 4 | 21217 | 21229 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85109641 |
| 15. | NW_001092590 | GAG | 4 | 21291 | 21301 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85109641 |
| 16. | NW_001092590 | CTT | 4 | 21794 | 21805 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092590 | CTG | 6 | 21812 | 21829 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 18. | NW_001092590 | TGT | 4 | 21947 | 21958 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 19. | NW_001092590 | CGA | 4 | 26001 | 26012 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109643 |
| 20. | NW_001092590 | CCT | 4 | 28011 | 28022 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109643 |
| 21. | NW_001092590 | CGA | 4 | 29796 | 29806 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85109643 |
| 22. | NW_001092590 | CCA | 4 | 30089 | 30100 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109643 |
| 23. | NW_001092590 | GTC | 8 | 31008 | 31032 | 25 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 24. | NW_001092590 | GAG | 4 | 31930 | 31942 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 25. | NW_001092590 | GCA | 4 | 33978 | 33988 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 26. | NW_001092590 | TTC | 4 | 35416 | 35428 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 27. | NW_001092590 | TCC | 4 | 41948 | 41959 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109649 |
| 28. | NW_001092590 | CTC | 4 | 42037 | 42048 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109649 |
| 29. | NW_001092590 | TCA | 4 | 44273 | 44284 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85109651 |
| 30. | NW_001092590 | TTC | 4 | 44395 | 44406 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109651 |
| 31. | NW_001092590 | TCC | 4 | 45521 | 45532 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109651 |
| 32. | NW_001092590 | CGT | 13 | 47564 | 47603 | 40 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092590 | GTC | 5 | 48339 | 48352 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 34. | NW_001092590 | ACA | 4 | 50602 | 50612 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092590 | TAT | 4 | 51542 | 51553 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001092590 | ACG | 4 | 51575 | 51586 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092590 | CAT | 4 | 52254 | 52265 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092590 | CAT | 4 | 55113 | 55124 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85109659 |
| 39. | NW_001092590 | CTC | 7 | 56344 | 56363 | 20 | 0.00% | 33.33% | 0.00% | 66.67% | 85109659 |
| 40. | NW_001092590 | TGG | 4 | 56958 | 56969 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109659 |
| 41. | NW_001092590 | GGT | 4 | 57395 | 57407 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 42. | NW_001092590 | GGA | 4 | 58395 | 58407 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 43. | NW_001092590 | TCA | 4 | 58636 | 58647 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092590 | GGC | 4 | 59787 | 59798 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 45. | NW_001092590 | AAG | 5 | 61635 | 61649 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85109661 |
| 46. | NW_001092590 | GTA | 4 | 62550 | 62561 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 47. | NW_001092590 | TAC | 4 | 62923 | 62935 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 48. | NW_001092590 | GTC | 5 | 63032 | 63046 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001092590 | GAA | 4 | 63464 | 63475 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 50. | NW_001092590 | CAC | 4 | 64195 | 64205 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85109663 |
| 51. | NW_001092590 | CAA | 6 | 64362 | 64378 | 17 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 52. | NW_001092590 | CAA | 5 | 64382 | 64395 | 14 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 53. | NW_001092590 | ACA | 4 | 64418 | 64432 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 54. | NW_001092590 | CCA | 5 | 64693 | 64707 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85109663 |
| 55. | NW_001092590 | ACC | 4 | 65069 | 65080 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109663 |
| 56. | NW_001092590 | CAA | 4 | 65232 | 65243 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 57. | NW_001092590 | GAT | 4 | 65331 | 65342 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85109663 |
| 58. | NW_001092590 | CAA | 5 | 65543 | 65557 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 59. | NW_001092590 | ACA | 4 | 65626 | 65637 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 60. | NW_001092590 | CAC | 5 | 65677 | 65691 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85109663 |
| 61. | NW_001092590 | CTC | 5 | 65716 | 65730 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85109663 |
| 62. | NW_001092590 | ACA | 4 | 65850 | 65861 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 63. | NW_001092590 | CTT | 4 | 65968 | 65979 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109663 |
| 64. | NW_001092590 | CAA | 5 | 66031 | 66045 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85109663 |
| 65. | NW_001092590 | ATC | 4 | 68728 | 68738 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 66. | NW_001092590 | CCT | 4 | 71581 | 71592 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109669 |
| 67. | NW_001092590 | ACC | 8 | 71745 | 71768 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | 85109669 |
| 68. | NW_001092590 | GCT | 10 | 72432 | 72464 | 33 | 0.00% | 33.33% | 33.33% | 33.33% | 85109669 |
| 69. | NW_001092590 | CCG | 4 | 74864 | 74875 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85109671 |
| 70. | NW_001092590 | GCC | 4 | 75014 | 75024 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85109671 |
| 71. | NW_001092590 | GGA | 5 | 75261 | 75275 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85109671 |
| 72. | NW_001092590 | GAG | 4 | 75565 | 75576 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109671 |
| 73. | NW_001092590 | ATG | 8 | 76838 | 76861 | 24 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 74. | NW_001092590 | TGG | 4 | 77168 | 77179 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 75. | NW_001092590 | CGC | 4 | 77251 | 77262 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 76. | NW_001092590 | ACC | 5 | 77416 | 77430 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 77. | NW_001092590 | GAT | 8 | 77513 | 77536 | 24 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 78. | NW_001092590 | CAC | 8 | 77681 | 77705 | 25 | 33.33% | 0.00% | 0.00% | 66.67% | 85109673 |
| 79. | NW_001092590 | GAG | 4 | 78400 | 78411 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109673 |
| 80. | NW_001092590 | CAC | 4 | 78490 | 78500 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85109673 |
| 81. | NW_001092590 | GCC | 4 | 79734 | 79745 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85109675 |
| 82. | NW_001092590 | CCT | 4 | 79981 | 79991 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85109675 |
| 83. | NW_001092590 | CTC | 4 | 81818 | 81829 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109675 |
| 84. | NW_001092590 | TTC | 4 | 82055 | 82066 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109675 |
| 85. | NW_001092590 | TGG | 7 | 82498 | 82518 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 86. | NW_001092590 | TTG | 5 | 82586 | 82600 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 87. | NW_001092590 | CTT | 4 | 83822 | 83834 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 88. | NW_001092590 | CGT | 4 | 84413 | 84424 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109677 |
| 89. | NW_001092590 | TAG | 4 | 84618 | 84629 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85109677 |
| 90. | NW_001092590 | CAG | 4 | 86724 | 86735 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109679 |
| 91. | NW_001092590 | CTT | 4 | 86968 | 86979 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109679 |
| 92. | NW_001092590 | AAG | 4 | 87390 | 87401 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 93. | NW_001092590 | ACC | 4 | 89449 | 89460 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109681 |
| 94. | NW_001092590 | CAA | 4 | 89727 | 89738 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109681 |
| 95. | NW_001092590 | AGA | 4 | 90286 | 90297 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85109681 |
| 96. | NW_001092590 | TGG | 4 | 90343 | 90355 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85109681 |
| 97. | NW_001092590 | GCG | 4 | 92525 | 92536 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 98. | NW_001092590 | CGG | 4 | 95228 | 95239 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 99. | NW_001092590 | GAC | 9 | 95885 | 95910 | 26 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 100. | NW_001092590 | GGT | 4 | 96783 | 96794 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 101. | NW_001092590 | TGT | 4 | 96802 | 96814 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |