List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092580 | ATT | 4 | 53 | 63 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092580 | TAA | 4 | 823 | 833 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092580 | TAG | 4 | 982 | 992 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092580 | CTA | 4 | 1766 | 1777 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 5. | NW_001092580 | TAA | 4 | 1869 | 1880 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092580 | AGA | 4 | 1974 | 1984 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092580 | GAA | 5 | 2006 | 2020 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 8. | NW_001092580 | TAA | 4 | 3699 | 3710 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092580 | GAA | 4 | 4889 | 4900 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092580 | TTC | 4 | 6079 | 6091 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 11. | NW_001092580 | ATA | 4 | 6093 | 6103 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092580 | AAT | 4 | 6195 | 6207 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 13. | NW_001092580 | CTA | 4 | 7030 | 7041 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001092580 | TAT | 4 | 7112 | 7122 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092580 | TAT | 4 | 7173 | 7184 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092580 | AGA | 4 | 7238 | 7248 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092580 | CTA | 4 | 8587 | 8597 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092580 | ATT | 4 | 9141 | 9152 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092580 | ATT | 4 | 9436 | 9447 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092580 | CTC | 4 | 10103 | 10114 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 21. | NW_001092580 | ACT | 4 | 10776 | 10786 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 22. | NW_001092580 | ATA | 4 | 11343 | 11354 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 23. | NW_001092580 | TAT | 4 | 11828 | 11838 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 24. | NW_001092580 | TAT | 4 | 12029 | 12040 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092580 | TAG | 4 | 12068 | 12079 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092580 | AAT | 4 | 12342 | 12354 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092580 | ATA | 6 | 12681 | 12699 | 19 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 28. | NW_001092580 | ATT | 4 | 13769 | 13780 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092580 | AAT | 4 | 14084 | 14095 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092580 | TAA | 4 | 14128 | 14139 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092580 | CTT | 4 | 14809 | 14820 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092580 | TAA | 4 | 15019 | 15029 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001092580 | ACT | 4 | 15800 | 15810 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092580 | TAA | 4 | 15933 | 15944 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092580 | TAA | 4 | 15990 | 16001 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001092580 | TTA | 4 | 16284 | 16294 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092580 | TAA | 4 | 16359 | 16370 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001092580 | CTT | 4 | 17164 | 17175 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092580 | TAC | 4 | 17247 | 17257 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001092580 | TAC | 4 | 17961 | 17972 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 41. | NW_001092580 | TTA | 4 | 18353 | 18364 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 42. | NW_001092580 | TTC | 4 | 18621 | 18631 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001092580 | ATT | 5 | 18709 | 18723 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001092580 | TAA | 4 | 19032 | 19043 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 45. | NW_001092580 | AGA | 4 | 20805 | 20816 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 46. | NW_001092580 | TAA | 4 | 21685 | 21695 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001092580 | TAA | 4 | 22593 | 22605 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092580 | CTA | 4 | 22628 | 22639 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001092580 | TAA | 4 | 22757 | 22767 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092580 | TTA | 4 | 22770 | 22781 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001092580 | AGA | 4 | 22836 | 22846 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 52. | NW_001092580 | ATA | 4 | 24006 | 24016 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092580 | GAA | 4 | 24211 | 24223 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 54. | NW_001092580 | GTA | 4 | 24733 | 24744 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 55. | NW_001092580 | TAT | 4 | 24782 | 24793 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 56. | NW_001092580 | TAT | 4 | 25989 | 26000 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092580 | TAA | 4 | 27186 | 27198 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 58. | NW_001092580 | TAT | 4 | 27228 | 27238 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001092580 | TTA | 4 | 27931 | 27942 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092580 | TAA | 5 | 28573 | 28587 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092580 | CTA | 4 | 28792 | 28802 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 62. | NW_001092580 | CTT | 4 | 28908 | 28920 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 63. | NW_001092580 | TTA | 4 | 28940 | 28950 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 64. | NW_001092580 | ATT | 4 | 29348 | 29359 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092580 | TAT | 4 | 29517 | 29527 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092580 | TAA | 4 | 30748 | 30759 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 67. | NW_001092580 | AAT | 4 | 30888 | 30899 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 68. | NW_001092580 | TCG | 4 | 31834 | 31844 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 69. | NW_001092580 | ATT | 4 | 32028 | 32039 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 70. | NW_001092580 | TAT | 10 | 32540 | 32569 | 30 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 71. | NW_001092580 | ATA | 4 | 33067 | 33078 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 72. | NW_001092580 | TAT | 4 | 33522 | 33532 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 73. | NW_001092580 | TAA | 4 | 33942 | 33952 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 74. | NW_001092580 | TAC | 4 | 34182 | 34193 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 75. | NW_001092580 | ATT | 6 | 34468 | 34485 | 18 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 76. | NW_001092580 | TAA | 4 | 34683 | 34693 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 77. | NW_001092580 | TTA | 9 | 34979 | 35005 | 27 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 78. | NW_001092580 | TAT | 4 | 35101 | 35112 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 79. | NW_001092580 | ATT | 4 | 36372 | 36383 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 80. | NW_001092580 | AAT | 4 | 38936 | 38948 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 81. | NW_001092580 | CTA | 4 | 39775 | 39786 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 82. | NW_001092580 | GTA | 4 | 39883 | 39894 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 83. | NW_001092580 | GAA | 4 | 39981 | 39992 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 84. | NW_001092580 | TAC | 4 | 40784 | 40795 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 85. | NW_001092580 | AAT | 4 | 41317 | 41328 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 86. | NW_001092580 | GGA | 4 | 41379 | 41390 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 87. | NW_001092580 | ATT | 4 | 41541 | 41551 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 88. | NW_001092580 | TAT | 4 | 41636 | 41646 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 89. | NW_001092580 | TAA | 4 | 42276 | 42287 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 90. | NW_001092580 | ATT | 4 | 43111 | 43122 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 91. | NW_001092580 | ATT | 4 | 43237 | 43248 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 92. | NW_001092580 | TTA | 4 | 43259 | 43270 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 93. | NW_001092580 | ATT | 4 | 43519 | 43530 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 94. | NW_001092580 | ATT | 4 | 43894 | 43905 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 95. | NW_001092580 | TAT | 4 | 44273 | 44284 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 96. | NW_001092580 | TAA | 4 | 46594 | 46605 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 97. | NW_001092580 | TAG | 4 | 46741 | 46752 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 98. | NW_001092580 | GTA | 4 | 46952 | 46962 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 99. | NW_001092580 | TAA | 4 | 47826 | 47838 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 100. | NW_001092580 | TCT | 4 | 47860 | 47872 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 101. | NW_001092580 | TAG | 4 | 48190 | 48200 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 102. | NW_001092580 | AGA | 4 | 48466 | 48477 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 103. | NW_001092580 | TAA | 4 | 48541 | 48552 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 104. | NW_001092580 | TAT | 4 | 48876 | 48887 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 105. | NW_001092580 | ATT | 4 | 48991 | 49002 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 106. | NW_001092580 | CTT | 4 | 49181 | 49191 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 107. | NW_001092580 | TAA | 4 | 50482 | 50494 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 108. | NW_001092580 | TAT | 4 | 52935 | 52946 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 109. | NW_001092580 | AGG | 4 | 52949 | 52960 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 110. | NW_001092580 | TTA | 4 | 53360 | 53371 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 111. | NW_001092580 | AGC | 4 | 53398 | 53409 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 112. | NW_001092580 | TAA | 4 | 54247 | 54258 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 113. | NW_001092580 | AAG | 4 | 54374 | 54385 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 114. | NW_001092580 | TTA | 4 | 55016 | 55026 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |