List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092576 | TAT | 5 | 477 | 491 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092576 | GTA | 4 | 812 | 823 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092576 | TAA | 4 | 822 | 834 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092576 | AAT | 4 | 1368 | 1378 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092576 | TAA | 4 | 1472 | 1482 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092576 | ATA | 4 | 2040 | 2050 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092576 | ATA | 4 | 2157 | 2168 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092576 | ATA | 4 | 4209 | 4220 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092576 | ATA | 4 | 4354 | 4365 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092576 | TAC | 4 | 4610 | 4620 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 11. | NW_001092576 | ATA | 4 | 4662 | 4676 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092576 | AGT | 4 | 5116 | 5127 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092576 | TAT | 4 | 5186 | 5196 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092576 | TAA | 4 | 6241 | 6252 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092576 | TAT | 4 | 7037 | 7048 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092576 | ATT | 4 | 7118 | 7129 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 17. | NW_001092576 | TTA | 4 | 7443 | 7453 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092576 | ATA | 8 | 8766 | 8788 | 23 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092576 | TTA | 4 | 9189 | 9199 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092576 | AAT | 5 | 9395 | 9409 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001092576 | ATC | 4 | 10766 | 10776 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85109169 |
| 22. | NW_001092576 | TGA | 7 | 11168 | 11190 | 23 | 33.33% | 33.33% | 33.33% | 0.00% | 85109171 |
| 23. | NW_001092576 | TTC | 4 | 11279 | 11290 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109171 |
| 24. | NW_001092576 | CTC | 4 | 11411 | 11422 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109171 |
| 25. | NW_001092576 | TTC | 4 | 11459 | 11470 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109171 |
| 26. | NW_001092576 | CTC | 4 | 11468 | 11480 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 85109171 |
| 27. | NW_001092576 | CTT | 8 | 11506 | 11529 | 24 | 0.00% | 66.67% | 0.00% | 33.33% | 85109171 |
| 28. | NW_001092576 | CAT | 4 | 13023 | 13034 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85109171 |
| 29. | NW_001092576 | CTT | 5 | 14398 | 14411 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092576 | CAT | 4 | 14866 | 14876 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 31. | NW_001092576 | TCT | 4 | 14882 | 14893 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092576 | CTG | 4 | 17429 | 17440 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092576 | CGT | 12 | 17859 | 17894 | 36 | 0.00% | 33.33% | 33.33% | 33.33% | 85109177 |
| 34. | NW_001092576 | ATC | 4 | 20020 | 20031 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092576 | CAT | 4 | 20289 | 20299 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85109179 |
| 36. | NW_001092576 | TCA | 4 | 20350 | 20361 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85109179 |
| 37. | NW_001092576 | GTG | 4 | 20572 | 20582 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85109179 |
| 38. | NW_001092576 | TGG | 5 | 20738 | 20752 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85109179 |
| 39. | NW_001092576 | TGG | 7 | 20756 | 20776 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85109179 |
| 40. | NW_001092576 | GTG | 4 | 20898 | 20909 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 41. | NW_001092576 | GAA | 4 | 21028 | 21038 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092576 | GCT | 4 | 22649 | 22660 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109181 |
| 43. | NW_001092576 | CGA | 4 | 26872 | 26882 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 44. | NW_001092576 | CGT | 4 | 26959 | 26970 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 45. | NW_001092576 | TCG | 4 | 27467 | 27478 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109183 |
| 46. | NW_001092576 | CCA | 4 | 28538 | 28548 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85109183 |
| 47. | NW_001092576 | GTT | 5 | 30358 | 30372 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092576 | TGT | 4 | 31595 | 31606 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092576 | CAT | 4 | 33618 | 33629 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 50. | NW_001092576 | CTC | 4 | 33641 | 33652 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 51. | NW_001092576 | GAG | 4 | 34202 | 34214 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85109185 |
| 52. | NW_001092576 | GGA | 4 | 35141 | 35151 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85109185 |
| 53. | NW_001092576 | AAT | 4 | 36623 | 36635 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001092576 | ATT | 4 | 36698 | 36709 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092576 | CTA | 4 | 37118 | 37129 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 56. | NW_001092576 | TAA | 5 | 37412 | 37426 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092576 | AGC | 4 | 37560 | 37570 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 58. | NW_001092576 | TTA | 4 | 37613 | 37623 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001092576 | ATT | 4 | 38663 | 38673 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | 85109187 |