List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092551 | CAC | 4 | 743 | 754 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85108322 |
| 2. | NW_001092551 | TTG | 4 | 7763 | 7774 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092551 | CGC | 4 | 8544 | 8554 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85108335 |
| 4. | NW_001092551 | CTT | 4 | 9745 | 9755 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85108335 |
| 5. | NW_001092551 | CCT | 4 | 17322 | 17333 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 6. | NW_001092551 | TCA | 4 | 20796 | 20807 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092551 | GAC | 4 | 22387 | 22398 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85108353 |
| 8. | NW_001092551 | CGG | 4 | 23075 | 23085 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85108353 |
| 9. | NW_001092551 | AGA | 5 | 24363 | 24377 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092551 | TTG | 4 | 25094 | 25105 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 11. | NW_001092551 | CGA | 4 | 26722 | 26733 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85108365 |
| 12. | NW_001092551 | GAG | 4 | 27059 | 27071 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85108365 |
| 13. | NW_001092551 | GAG | 4 | 27111 | 27122 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 14. | NW_001092551 | GAA | 4 | 27282 | 27292 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092551 | CTT | 4 | 29033 | 29043 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85108369 |
| 16. | NW_001092551 | GTC | 4 | 34359 | 34370 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85108369 |
| 17. | NW_001092551 | GTA | 4 | 45658 | 45668 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85108381 |
| 18. | NW_001092551 | CGA | 4 | 45909 | 45920 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 19. | NW_001092551 | ATA | 4 | 46046 | 46057 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092551 | TAT | 4 | 46210 | 46221 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001092551 | TAA | 4 | 47065 | 47076 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092551 | TGC | 4 | 47981 | 47992 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85108385 |
| 23. | NW_001092551 | AAC | 4 | 58604 | 58615 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85108401 |
| 24. | NW_001092551 | ATG | 4 | 59289 | 59300 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 25. | NW_001092551 | TCA | 4 | 63977 | 63988 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85108412 |
| 26. | NW_001092551 | TGA | 4 | 66328 | 66338 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092551 | AAC | 4 | 66697 | 66708 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092551 | CGA | 4 | 67449 | 67460 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 29. | NW_001092551 | GAT | 4 | 68092 | 68103 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001092551 | TGA | 7 | 69195 | 69214 | 20 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001092551 | ATC | 4 | 69495 | 69506 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092551 | CAG | 4 | 69835 | 69845 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85108416 |
| 33. | NW_001092551 | CTC | 4 | 69970 | 69981 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85108416 |
| 34. | NW_001092551 | AGG | 4 | 73912 | 73923 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85108421 |
| 35. | NW_001092551 | GAA | 4 | 74273 | 74284 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85108421 |
| 36. | NW_001092551 | GCC | 5 | 74295 | 74309 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85108421 |
| 37. | NW_001092551 | CGC | 8 | 74432 | 74455 | 24 | 0.00% | 0.00% | 33.33% | 66.67% | 85108421 |
| 38. | NW_001092551 | AAG | 8 | 74460 | 74483 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | 85108421 |
| 39. | NW_001092551 | CTC | 4 | 74512 | 74523 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85108421 |
| 40. | NW_001092551 | GAT | 4 | 75655 | 75665 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092551 | AAG | 4 | 76116 | 76126 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85108425 |
| 42. | NW_001092551 | CTG | 15 | 79513 | 79556 | 44 | 0.00% | 33.33% | 33.33% | 33.33% | 85108425 |
| 43. | NW_001092551 | TGG | 4 | 80656 | 80667 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 44. | NW_001092551 | GCC | 5 | 81976 | 81990 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85108429 |
| 45. | NW_001092551 | GGC | 4 | 85706 | 85718 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 46. | NW_001092551 | CCT | 17 | 86382 | 86432 | 51 | 0.00% | 33.33% | 0.00% | 66.67% | 85108437 |
| 47. | NW_001092551 | ACA | 4 | 86452 | 86463 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85108437 |
| 48. | NW_001092551 | GAA | 4 | 87851 | 87861 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092551 | CCA | 4 | 88126 | 88137 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85108441 |
| 50. | NW_001092551 | TGT | 4 | 90070 | 90082 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 51. | NW_001092551 | AAG | 4 | 91574 | 91586 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 52. | NW_001092551 | CTA | 4 | 95233 | 95243 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 53. | NW_001092551 | TGC | 4 | 98691 | 98702 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85108449 |
| 54. | NW_001092551 | TGT | 4 | 98715 | 98726 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85108449 |
| 55. | NW_001092551 | CGG | 4 | 98986 | 98997 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85108449 |
| 56. | NW_001092551 | ACA | 11 | 99856 | 99889 | 34 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 57. | NW_001092551 | CAT | 4 | 104361 | 104371 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 58. | NW_001092551 | CGC | 4 | 104587 | 104597 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85108457 |
| 59. | NW_001092551 | AAG | 5 | 104687 | 104701 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85108457 |
| 60. | NW_001092551 | TAC | 4 | 105020 | 105030 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85108457 |
| 61. | NW_001092551 | CTC | 5 | 105455 | 105468 | 14 | 0.00% | 33.33% | 0.00% | 66.67% | 85108457 |
| 62. | NW_001092551 | CGA | 4 | 105505 | 105516 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85108457 |
| 63. | NW_001092551 | GGA | 4 | 105874 | 105884 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85108457 |
| 64. | NW_001092551 | TGG | 5 | 107261 | 107275 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85108462 |
| 65. | NW_001092551 | GAT | 4 | 109041 | 109051 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85108466 |
| 66. | NW_001092551 | GGA | 4 | 109401 | 109411 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85108466 |
| 67. | NW_001092551 | AGC | 4 | 109918 | 109929 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85108466 |
| 68. | NW_001092551 | GTG | 7 | 111999 | 112019 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85108466 |
| 69. | NW_001092551 | ATG | 4 | 113892 | 113902 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85108471 |
| 70. | NW_001092551 | GTG | 4 | 113904 | 113914 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85108471 |
| 71. | NW_001092551 | CCG | 4 | 114626 | 114637 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85108471 |
| 72. | NW_001092551 | GTT | 4 | 114759 | 114770 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85108471 |
| 73. | NW_001092551 | GTG | 4 | 114785 | 114796 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85108471 |
| 74. | NW_001092551 | AGA | 9 | 115052 | 115078 | 27 | 66.67% | 0.00% | 33.33% | 0.00% | 85108471 |
| 75. | NW_001092551 | TGA | 4 | 118604 | 118615 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 76. | NW_001092551 | ACC | 4 | 120899 | 120909 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85108479 |
| 77. | NW_001092551 | TCC | 4 | 120910 | 120921 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85108479 |
| 78. | NW_001092551 | GAA | 8 | 122072 | 122095 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | 85108479 |
| 79. | NW_001092551 | TCA | 4 | 122126 | 122137 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85108479 |
| 80. | NW_001092551 | GAG | 4 | 122885 | 122896 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85108479 |
| 81. | NW_001092551 | GAA | 5 | 122894 | 122908 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85108479 |
| 82. | NW_001092551 | GAG | 4 | 122909 | 122920 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85108479 |
| 83. | NW_001092551 | CAG | 4 | 123005 | 123016 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85108479 |
| 84. | NW_001092551 | GAG | 5 | 123035 | 123050 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | 85108479 |
| 85. | NW_001092551 | AGG | 4 | 123651 | 123662 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85108479 |
| 86. | NW_001092551 | GAA | 4 | 124148 | 124158 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 87. | NW_001092551 | CCT | 4 | 124589 | 124600 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85108483 |
| 88. | NW_001092551 | CCA | 4 | 126726 | 126737 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 89. | NW_001092551 | AGT | 4 | 127447 | 127458 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 90. | NW_001092551 | TGG | 4 | 133404 | 133415 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85108495 |
| 91. | NW_001092551 | CGA | 4 | 135977 | 135988 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85108499 |
| 92. | NW_001092551 | ATG | 4 | 143439 | 143450 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85108508 |
| 93. | NW_001092551 | CTG | 4 | 143540 | 143550 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85108508 |
| 94. | NW_001092551 | CTT | 4 | 144226 | 144237 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85108508 |
| 95. | NW_001092551 | TCC | 4 | 150032 | 150043 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85108513 |
| 96. | NW_001092551 | GAT | 5 | 150915 | 150930 | 16 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 97. | NW_001092551 | GCG | 4 | 152030 | 152041 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85108517 |
| 98. | NW_001092551 | CCA | 4 | 152214 | 152225 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85108517 |
| 99. | NW_001092551 | GTT | 8 | 152472 | 152495 | 24 | 0.00% | 66.67% | 33.33% | 0.00% | 85108517 |
| 100. | NW_001092551 | ACC | 5 | 152537 | 152551 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85108517 |
| 101. | NW_001092551 | TCC | 4 | 154388 | 154398 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85108521 |
| 102. | NW_001092551 | CTG | 4 | 154398 | 154409 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85108521 |
| 103. | NW_001092551 | GTG | 5 | 154481 | 154495 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85108521 |
| 104. | NW_001092551 | GGC | 4 | 155212 | 155224 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85108521 |
| 105. | NW_001092551 | CAC | 4 | 157583 | 157594 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 106. | NW_001092551 | CAA | 6 | 158584 | 158601 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | 85108525 |
| 107. | NW_001092551 | GGT | 4 | 159142 | 159153 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85108525 |
| 108. | NW_001092551 | GTG | 7 | 159315 | 159336 | 22 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 109. | NW_001092551 | TTC | 7 | 160289 | 160309 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 85108529 |
| 110. | NW_001092551 | TCC | 5 | 161229 | 161243 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85108529 |
| 111. | NW_001092551 | TTG | 7 | 161244 | 161264 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85108529 |
| 112. | NW_001092551 | TCA | 4 | 161279 | 161290 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85108529 |
| 113. | NW_001092551 | AGA | 4 | 163184 | 163194 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 114. | NW_001092551 | AAC | 4 | 165981 | 165992 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85108533 |
| 115. | NW_001092551 | CTC | 4 | 166016 | 166027 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85108533 |
| 116. | NW_001092551 | GAA | 4 | 166038 | 166049 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85108533 |
| 117. | NW_001092551 | CAC | 4 | 166053 | 166063 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85108533 |