List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092546 | TAGG | 11 | 882 | 925 | 44 | 25.00% | 25.00% | 50.00% | 0.00% | 85107238 |
| 2. | NW_001092546 | CTTT | 3 | 5330 | 5341 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 3. | NW_001092546 | GCCC | 5 | 7871 | 7891 | 21 | 0.00% | 0.00% | 25.00% | 75.00% | 85107250 |
| 4. | NW_001092546 | AGTT | 3 | 9609 | 9619 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 5. | NW_001092546 | AGTC | 3 | 10925 | 10936 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 6. | NW_001092546 | GCCT | 3 | 14108 | 14119 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 7. | NW_001092546 | AAAG | 3 | 16604 | 16615 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 8. | NW_001092546 | CAAA | 3 | 19481 | 19491 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092546 | TCCC | 3 | 20746 | 20757 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85107262 |
| 10. | NW_001092546 | CCAT | 4 | 22577 | 22592 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092546 | AAGG | 3 | 23355 | 23366 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85107265 |
| 12. | NW_001092546 | GCGG | 3 | 26346 | 26357 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 13. | NW_001092546 | TAAA | 3 | 30701 | 30711 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092546 | TCCA | 3 | 31631 | 31641 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 15. | NW_001092546 | ACCC | 3 | 37236 | 37247 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | 85107285 |
| 16. | NW_001092546 | AACC | 3 | 38655 | 38665 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 17. | NW_001092546 | GCTT | 3 | 38747 | 38758 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 18. | NW_001092546 | ATCC | 5 | 40107 | 40126 | 20 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 19. | NW_001092546 | GGCG | 3 | 41742 | 41754 | 13 | 0.00% | 0.00% | 75.00% | 25.00% | 85107289 |
| 20. | NW_001092546 | GGGT | 3 | 45960 | 45971 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | 85107297 |
| 21. | NW_001092546 | TGAG | 3 | 46113 | 46123 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85107297 |
| 22. | NW_001092546 | CTGT | 3 | 47301 | 47311 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85107297 |
| 23. | NW_001092546 | CAGG | 3 | 49883 | 49893 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 24. | NW_001092546 | TTTG | 3 | 50296 | 50307 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NW_001092546 | ATGG | 3 | 53425 | 53435 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85107301 |
| 26. | NW_001092546 | ATGA | 3 | 55184 | 55195 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 27. | NW_001092546 | TCCA | 3 | 55977 | 55987 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85107305 |
| 28. | NW_001092546 | GACA | 3 | 57231 | 57241 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 29. | NW_001092546 | GTTG | 3 | 59994 | 60004 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | 85107309 |
| 30. | NW_001092546 | CTCC | 3 | 62220 | 62231 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85107313 |
| 31. | NW_001092546 | GGAG | 3 | 62736 | 62748 | 13 | 25.00% | 0.00% | 75.00% | 0.00% | 85107313 |
| 32. | NW_001092546 | CTGG | 3 | 65987 | 65997 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85107317 |
| 33. | NW_001092546 | TCCA | 3 | 67612 | 67623 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 34. | NW_001092546 | GGAG | 3 | 70825 | 70836 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85107325 |
| 35. | NW_001092546 | CCAG | 3 | 75479 | 75490 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 36. | NW_001092546 | GACA | 3 | 75913 | 75925 | 13 | 50.00% | 0.00% | 25.00% | 25.00% | 85107333 |
| 37. | NW_001092546 | GTAT | 3 | 77606 | 77616 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 38. | NW_001092546 | TGGG | 3 | 82022 | 82033 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 39. | NW_001092546 | CCAT | 3 | 85522 | 85533 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 40. | NW_001092546 | CATC | 3 | 85736 | 85747 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 41. | NW_001092546 | TGGA | 3 | 88637 | 88649 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | 85107353 |
| 42. | NW_001092546 | ATGG | 3 | 91796 | 91808 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 43. | NW_001092546 | GCCG | 4 | 92749 | 92764 | 16 | 0.00% | 0.00% | 50.00% | 50.00% | Non-Coding |
| 44. | NW_001092546 | TCCA | 4 | 94375 | 94389 | 15 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 45. | NW_001092546 | GTTG | 3 | 99945 | 99956 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 46. | NW_001092546 | ATCC | 3 | 102103 | 102114 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85107365 |
| 47. | NW_001092546 | AGTG | 4 | 103169 | 103183 | 15 | 25.00% | 25.00% | 50.00% | 0.00% | 85107365 |
| 48. | NW_001092546 | AATG | 3 | 104845 | 104857 | 13 | 50.00% | 25.00% | 25.00% | 0.00% | 85107369 |
| 49. | NW_001092546 | ACTT | 3 | 107397 | 107407 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 50. | NW_001092546 | TGAA | 3 | 110865 | 110876 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 51. | NW_001092546 | GTTA | 3 | 111144 | 111155 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 52. | NW_001092546 | AGAA | 5 | 111185 | 111205 | 21 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 53. | NW_001092546 | CTAC | 4 | 111485 | 111500 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 54. | NW_001092546 | TCTT | 3 | 111554 | 111565 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 55. | NW_001092546 | TTGC | 6 | 113920 | 113942 | 23 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 56. | NW_001092546 | CAGG | 3 | 120535 | 120546 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |