List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092545 | TTAA | 4 | 921 | 937 | 17 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092545 | AATT | 3 | 2273 | 2284 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092545 | TATT | 3 | 3252 | 3263 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092545 | AGGG | 3 | 5432 | 5443 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 5. | NW_001092545 | TACT | 3 | 5707 | 5718 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 6. | NW_001092545 | ATTA | 4 | 6991 | 7005 | 15 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092545 | AAAT | 3 | 7633 | 7643 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092545 | TTCT | 3 | 7874 | 7885 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092545 | ACCT | 3 | 8538 | 8548 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 10. | NW_001092545 | ACCT | 4 | 10168 | 10183 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092545 | CGAG | 3 | 11456 | 11467 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85107087 |
| 12. | NW_001092545 | GCGG | 3 | 21547 | 21558 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 13. | NW_001092545 | TAGA | 3 | 26889 | 26900 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 14. | NW_001092545 | GCAA | 3 | 30967 | 30977 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 15. | NW_001092545 | ACCC | 3 | 42206 | 42216 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | 85107117 |
| 16. | NW_001092545 | ATCA | 3 | 42502 | 42512 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | 85107117 |
| 17. | NW_001092545 | TACA | 3 | 43663 | 43674 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 85107117 |
| 18. | NW_001092545 | GTCA | 3 | 49135 | 49145 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 19. | NW_001092545 | GCCA | 3 | 50209 | 50221 | 13 | 25.00% | 0.00% | 25.00% | 50.00% | 85107125 |
| 20. | NW_001092545 | TCCT | 3 | 53867 | 53877 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | 85107133 |
| 21. | NW_001092545 | CCAT | 3 | 56891 | 56901 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85107133 |
| 22. | NW_001092545 | GGCC | 3 | 58486 | 58496 | 11 | 0.00% | 0.00% | 50.00% | 50.00% | 85107137 |
| 23. | NW_001092545 | TGCA | 3 | 58864 | 58874 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85107137 |
| 24. | NW_001092545 | GAAT | 3 | 60435 | 60446 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NW_001092545 | CTGT | 3 | 61115 | 61126 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 26. | NW_001092545 | TTCG | 3 | 62291 | 62301 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 27. | NW_001092545 | ACCT | 3 | 68208 | 68218 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 28. | NW_001092545 | TCCA | 3 | 69371 | 69381 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 29. | NW_001092545 | CACG | 3 | 72242 | 72253 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 30. | NW_001092545 | TGCC | 3 | 79460 | 79471 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 31. | NW_001092545 | CAAT | 3 | 83252 | 83263 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 85107162 |
| 32. | NW_001092545 | GAAG | 4 | 85008 | 85023 | 16 | 50.00% | 0.00% | 50.00% | 0.00% | 85107166 |
| 33. | NW_001092545 | GAGC | 3 | 86691 | 86701 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 34. | NW_001092545 | CTAC | 3 | 94910 | 94920 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85107173 |
| 35. | NW_001092545 | CTCC | 3 | 94921 | 94932 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85107173 |
| 36. | NW_001092545 | CTTT | 3 | 96417 | 96427 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 37. | NW_001092545 | TGAG | 3 | 101074 | 101084 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 85107181 |
| 38. | NW_001092545 | GCTT | 3 | 101120 | 101131 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | 85107181 |
| 39. | NW_001092545 | TGGA | 3 | 102772 | 102782 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 40. | NW_001092545 | GTCC | 3 | 111629 | 111639 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 41. | NW_001092545 | GGGA | 3 | 113005 | 113016 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85107189 |
| 42. | NW_001092545 | CCCA | 3 | 113601 | 113612 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 43. | NW_001092545 | AGCC | 3 | 114271 | 114282 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85107193 |
| 44. | NW_001092545 | GTAT | 3 | 117852 | 117863 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85107193 |