List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092534 | CTAA | 3 | 1971 | 1982 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 2. | NW_001092534 | AATT | 3 | 2726 | 2736 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | 85105677 |
| 3. | NW_001092534 | CAAA | 3 | 4701 | 4711 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 4. | NW_001092534 | TCAT | 3 | 13798 | 13809 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 5. | NW_001092534 | CTTT | 3 | 15547 | 15558 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 6. | NW_001092534 | TTCT | 3 | 15731 | 15742 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NW_001092534 | CATT | 3 | 25515 | 25525 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092534 | GAAG | 3 | 25526 | 25537 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 9. | NW_001092534 | GTTG | 3 | 28502 | 28514 | 13 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NW_001092534 | GCGA | 3 | 33235 | 33247 | 13 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 11. | NW_001092534 | TCAA | 3 | 34856 | 34866 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 12. | NW_001092534 | TTCC | 3 | 36081 | 36092 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 13. | NW_001092534 | GCTT | 6 | 36106 | 36129 | 24 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 14. | NW_001092534 | TGGA | 3 | 36993 | 37003 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 15. | NW_001092534 | AAAT | 3 | 37342 | 37353 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092534 | TTTG | 3 | 37992 | 38003 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 17. | NW_001092534 | GGTA | 3 | 38706 | 38717 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 18. | NW_001092534 | TACG | 3 | 39938 | 39949 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 19. | NW_001092534 | GGGC | 3 | 43246 | 43256 | 11 | 0.00% | 0.00% | 75.00% | 25.00% | 85105742 |
| 20. | NW_001092534 | GGCG | 3 | 43621 | 43632 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 21. | NW_001092534 | GTAG | 3 | 43658 | 43669 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 22. | NW_001092534 | TTGT | 3 | 43780 | 43791 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 23. | NW_001092534 | TGTA | 3 | 44389 | 44400 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 24. | NW_001092534 | CTTG | 3 | 44529 | 44540 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 25. | NW_001092534 | CTCC | 3 | 49235 | 49247 | 13 | 0.00% | 25.00% | 0.00% | 75.00% | 85105746 |
| 26. | NW_001092534 | GTAG | 4 | 50450 | 50464 | 15 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 27. | NW_001092534 | ACCT | 3 | 53892 | 53902 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 28. | NW_001092534 | GAAG | 4 | 55657 | 55671 | 15 | 50.00% | 0.00% | 50.00% | 0.00% | 85105750 |
| 29. | NW_001092534 | CATT | 3 | 56367 | 56377 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 30. | NW_001092534 | TTCC | 3 | 57481 | 57491 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NW_001092534 | GGAC | 3 | 57615 | 57626 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 32. | NW_001092534 | CTCC | 3 | 62841 | 62851 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 33. | NW_001092534 | CGGC | 3 | 63939 | 63950 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | 85105758 |