List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092533 | GCG | 4 | 367 | 378 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 2. | NW_001092533 | GAT | 4 | 603 | 614 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092533 | TGA | 6 | 682 | 699 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092533 | TTG | 4 | 968 | 978 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092533 | TGG | 8 | 1726 | 1750 | 25 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 6. | NW_001092533 | GGT | 5 | 1749 | 1763 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 7. | NW_001092533 | GTC | 4 | 1814 | 1825 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85105602 |
| 8. | NW_001092533 | GCG | 4 | 2105 | 2117 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85105602 |
| 9. | NW_001092533 | GCG | 4 | 2252 | 2264 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85105602 |
| 10. | NW_001092533 | GTG | 12 | 2578 | 2613 | 36 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 11. | NW_001092533 | TCT | 4 | 4437 | 4448 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092533 | CAC | 4 | 4708 | 4720 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 13. | NW_001092533 | AAC | 4 | 5371 | 5382 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001092533 | GCA | 4 | 5449 | 5461 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 15. | NW_001092533 | GAA | 4 | 6091 | 6102 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 16. | NW_001092533 | TAC | 5 | 8498 | 8511 | 14 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092533 | TGA | 4 | 9921 | 9932 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85105610 |
| 18. | NW_001092533 | GAG | 4 | 10187 | 10197 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 19. | NW_001092533 | CAG | 4 | 10542 | 10553 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 20. | NW_001092533 | TCC | 4 | 12155 | 12166 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 21. | NW_001092533 | ACA | 4 | 16100 | 16111 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85105613 |
| 22. | NW_001092533 | CCG | 4 | 16151 | 16162 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85105613 |
| 23. | NW_001092533 | AGG | 4 | 16889 | 16900 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85105613 |
| 24. | NW_001092533 | GAC | 4 | 18316 | 18327 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 25. | NW_001092533 | CAA | 19 | 19537 | 19593 | 57 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092533 | CAC | 4 | 19844 | 19854 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001092533 | ACG | 5 | 20528 | 20542 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85105617 |
| 28. | NW_001092533 | GAA | 4 | 21234 | 21245 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85105617 |
| 29. | NW_001092533 | CAG | 4 | 22691 | 22702 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85105617 |
| 30. | NW_001092533 | GGC | 4 | 22837 | 22848 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85105617 |
| 31. | NW_001092533 | CTG | 4 | 23095 | 23105 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 32. | NW_001092533 | TCT | 5 | 23194 | 23210 | 17 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001092533 | TAC | 4 | 23511 | 23522 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092533 | CAC | 5 | 23520 | 23534 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 35. | NW_001092533 | TGT | 5 | 24767 | 24781 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85105620 |
| 36. | NW_001092533 | GTC | 10 | 24798 | 24827 | 30 | 0.00% | 33.33% | 33.33% | 33.33% | 85105620 |
| 37. | NW_001092533 | CGG | 4 | 24862 | 24873 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85105620 |
| 38. | NW_001092533 | TCC | 8 | 24959 | 24982 | 24 | 0.00% | 33.33% | 0.00% | 66.67% | 85105620 |
| 39. | NW_001092533 | CTC | 5 | 24985 | 24999 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85105620 |
| 40. | NW_001092533 | GGT | 4 | 25269 | 25283 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 41. | NW_001092533 | GTG | 5 | 25300 | 25314 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 42. | NW_001092533 | GTA | 4 | 28575 | 28585 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85105624 |
| 43. | NW_001092533 | ACT | 4 | 29139 | 29150 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092533 | CGT | 4 | 31376 | 31387 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85105627 |
| 45. | NW_001092533 | GTG | 4 | 34164 | 34174 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85105627 |
| 46. | NW_001092533 | CTC | 4 | 35411 | 35421 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 47. | NW_001092533 | CAT | 4 | 35451 | 35462 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 48. | NW_001092533 | CTC | 5 | 36281 | 36295 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85105631 |
| 49. | NW_001092533 | CAG | 4 | 36971 | 36982 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85105631 |
| 50. | NW_001092533 | CGA | 7 | 36985 | 37005 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85105631 |
| 51. | NW_001092533 | GAG | 5 | 37215 | 37229 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85105631 |
| 52. | NW_001092533 | AAC | 4 | 38290 | 38300 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 53. | NW_001092533 | GGT | 4 | 39082 | 39093 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85105634 |
| 54. | NW_001092533 | GCT | 7 | 39110 | 39133 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85105634 |
| 55. | NW_001092533 | GTG | 5 | 39170 | 39184 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85105634 |
| 56. | NW_001092533 | ACC | 4 | 39261 | 39272 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85105634 |
| 57. | NW_001092533 | TGG | 12 | 39288 | 39323 | 36 | 0.00% | 33.33% | 66.67% | 0.00% | 85105634 |
| 58. | NW_001092533 | GTA | 5 | 39776 | 39791 | 16 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 59. | NW_001092533 | GGC | 4 | 40062 | 40073 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 60. | NW_001092533 | GCC | 4 | 41251 | 41262 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85105638 |
| 61. | NW_001092533 | GCC | 4 | 41439 | 41450 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85105638 |
| 62. | NW_001092533 | CTT | 5 | 43392 | 43406 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85105641 |
| 63. | NW_001092533 | CCG | 4 | 43511 | 43522 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85105641 |
| 64. | NW_001092533 | GCA | 8 | 47200 | 47224 | 25 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 65. | NW_001092533 | TGT | 4 | 50023 | 50033 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 66. | NW_001092533 | AAT | 4 | 50044 | 50055 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 67. | NW_001092533 | CCT | 4 | 50435 | 50446 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85105648 |
| 68. | NW_001092533 | CTC | 4 | 57886 | 57896 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |