List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092532 | AATT | 3 | 350 | 362 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092532 | TTAA | 3 | 1511 | 1522 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092532 | TCCT | 3 | 2054 | 2065 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NW_001092532 | CTTT | 3 | 4722 | 4732 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 5. | NW_001092532 | CATC | 3 | 11046 | 11057 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 6. | NW_001092532 | GACC | 3 | 11174 | 11184 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 7. | NW_001092532 | GGGT | 3 | 16951 | 16962 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 8. | NW_001092532 | TCAG | 3 | 18542 | 18553 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85105560 |
| 9. | NW_001092532 | AACC | 3 | 21687 | 21697 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 10. | NW_001092532 | CCAA | 4 | 21738 | 21753 | 16 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 11. | NW_001092532 | TTCG | 4 | 21874 | 21889 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | 85105564 |
| 12. | NW_001092532 | GACA | 4 | 22680 | 22694 | 15 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 13. | NW_001092532 | ACTG | 3 | 23813 | 23824 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 14. | NW_001092532 | TTGG | 3 | 25665 | 25675 | 11 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 15. | NW_001092532 | CTTG | 3 | 28421 | 28432 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092532 | CAGC | 3 | 28610 | 28622 | 13 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 17. | NW_001092532 | TCTT | 5 | 29881 | 29899 | 19 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 18. | NW_001092532 | GCAC | 3 | 31481 | 31491 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 19. | NW_001092532 | CGGG | 3 | 31645 | 31655 | 11 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 20. | NW_001092532 | CTTG | 3 | 33125 | 33135 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 21. | NW_001092532 | CAGC | 3 | 35664 | 35675 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 22. | NW_001092532 | GACA | 3 | 35969 | 35980 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 23. | NW_001092532 | AGCA | 3 | 36475 | 36486 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 24. | NW_001092532 | CGCC | 3 | 36722 | 36733 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 25. | NW_001092532 | CAGT | 3 | 37375 | 37385 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 85105571 |
| 26. | NW_001092532 | CTCG | 3 | 38007 | 38017 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 85105571 |
| 27. | NW_001092532 | GCAG | 3 | 39176 | 39187 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 28. | NW_001092532 | AAGC | 3 | 39293 | 39304 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 29. | NW_001092532 | CTTT | 3 | 39311 | 39321 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 30. | NW_001092532 | ATTT | 3 | 40281 | 40291 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092532 | ATCC | 6 | 40383 | 40406 | 24 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 32. | NW_001092532 | GATA | 3 | 40691 | 40702 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 33. | NW_001092532 | AAGG | 3 | 40763 | 40775 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 34. | NW_001092532 | TGGA | 3 | 40797 | 40808 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 35. | NW_001092532 | AAGC | 3 | 43841 | 43852 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 36. | NW_001092532 | TCTT | 3 | 46760 | 46771 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 37. | NW_001092532 | TCGA | 3 | 53058 | 53070 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 38. | NW_001092532 | GCTG | 3 | 53120 | 53131 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 39. | NW_001092532 | TGGT | 3 | 53921 | 53932 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | 85105583 |
| 40. | NW_001092532 | AGGT | 4 | 55042 | 55057 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 41. | NW_001092532 | CCGA | 3 | 55240 | 55251 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 42. | NW_001092532 | CCCA | 3 | 56126 | 56138 | 13 | 25.00% | 0.00% | 0.00% | 75.00% | 85105587 |
| 43. | NW_001092532 | CAAG | 3 | 57490 | 57500 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |