List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092530 | TAA | 4 | 146 | 158 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092530 | TAT | 4 | 1939 | 1950 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092530 | ATT | 4 | 2470 | 2481 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092530 | TAT | 4 | 2555 | 2565 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092530 | TAT | 4 | 2595 | 2606 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092530 | TTA | 4 | 3018 | 3029 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092530 | CTG | 4 | 4076 | 4086 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 8. | NW_001092530 | TCC | 4 | 5080 | 5091 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85105378 |
| 9. | NW_001092530 | AAC | 4 | 8783 | 8793 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092530 | AGG | 4 | 10176 | 10187 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85105384 |
| 11. | NW_001092530 | AAC | 5 | 11591 | 11605 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85105384 |
| 12. | NW_001092530 | GAA | 5 | 11799 | 11814 | 16 | 66.67% | 0.00% | 33.33% | 0.00% | 85105384 |
| 13. | NW_001092530 | TGT | 4 | 12787 | 12797 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85105387 |
| 14. | NW_001092530 | GGC | 4 | 12831 | 12842 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85105387 |
| 15. | NW_001092530 | ACC | 4 | 12872 | 12883 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85105387 |
| 16. | NW_001092530 | TTG | 4 | 12912 | 12923 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85105387 |
| 17. | NW_001092530 | GGC | 4 | 14033 | 14044 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85105387 |
| 18. | NW_001092530 | GTG | 16 | 16299 | 16345 | 47 | 0.00% | 33.33% | 66.67% | 0.00% | 85105387 |
| 19. | NW_001092530 | TAC | 4 | 19739 | 19750 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85105391 |
| 20. | NW_001092530 | CAG | 8 | 20031 | 20054 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 85105391 |
| 21. | NW_001092530 | CAC | 4 | 20058 | 20070 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85105391 |
| 22. | NW_001092530 | TTC | 4 | 20436 | 20447 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 23. | NW_001092530 | TCC | 12 | 21060 | 21095 | 36 | 0.00% | 33.33% | 0.00% | 66.67% | 85105396 |
| 24. | NW_001092530 | TCA | 21 | 22925 | 22990 | 66 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092530 | AGC | 5 | 23131 | 23145 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 26. | NW_001092530 | GCG | 7 | 23156 | 23176 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 27. | NW_001092530 | GAG | 4 | 23234 | 23246 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092530 | CCA | 4 | 23584 | 23595 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85105399 |
| 29. | NW_001092530 | GGT | 4 | 23939 | 23950 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85105399 |
| 30. | NW_001092530 | TCT | 4 | 24037 | 24047 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85105399 |
| 31. | NW_001092530 | GTT | 7 | 24051 | 24071 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85105399 |
| 32. | NW_001092530 | GTT | 4 | 24314 | 24325 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85105399 |
| 33. | NW_001092530 | ACA | 4 | 25158 | 25169 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092530 | GAA | 10 | 26984 | 27013 | 30 | 66.67% | 0.00% | 33.33% | 0.00% | 85105402 |
| 35. | NW_001092530 | CAG | 4 | 27737 | 27748 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85105406 |
| 36. | NW_001092530 | TGT | 4 | 28067 | 28078 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85105406 |
| 37. | NW_001092530 | ACG | 22 | 28100 | 28165 | 66 | 33.33% | 0.00% | 33.33% | 33.33% | 85105406 |
| 38. | NW_001092530 | TGC | 4 | 28187 | 28198 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85105406 |
| 39. | NW_001092530 | GAT | 5 | 32016 | 32030 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 40. | NW_001092530 | TGG | 4 | 32104 | 32115 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 41. | NW_001092530 | TCC | 13 | 32755 | 32793 | 39 | 0.00% | 33.33% | 0.00% | 66.67% | 85105414 |
| 42. | NW_001092530 | ACC | 6 | 32821 | 32838 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | 85105414 |
| 43. | NW_001092530 | TCA | 4 | 33582 | 33593 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85105414 |
| 44. | NW_001092530 | TCA | 4 | 33721 | 33732 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85105414 |
| 45. | NW_001092530 | TTG | 77 | 34127 | 34356 | 230 | 0.00% | 66.67% | 33.33% | 0.00% | 85105414 |
| 46. | NW_001092530 | CCT | 4 | 37039 | 37049 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 47. | NW_001092530 | TCC | 4 | 39291 | 39302 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85105418 |
| 48. | NW_001092530 | CCT | 4 | 41858 | 41869 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85105418 |
| 49. | NW_001092530 | TCC | 4 | 43051 | 43061 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85105422 |
| 50. | NW_001092530 | CGC | 4 | 43080 | 43092 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85105422 |
| 51. | NW_001092530 | AGC | 4 | 43532 | 43543 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85105422 |
| 52. | NW_001092530 | AGA | 4 | 44272 | 44283 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092530 | AAC | 4 | 44470 | 44481 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 54. | NW_001092530 | GAG | 5 | 45580 | 45594 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85105428 |
| 55. | NW_001092530 | GGT | 4 | 45639 | 45650 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 56. | NW_001092530 | GGT | 4 | 46512 | 46523 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85105432 |
| 57. | NW_001092530 | TGT | 4 | 47549 | 47560 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85105432 |
| 58. | NW_001092530 | CTC | 5 | 51079 | 51093 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85105436 |
| 59. | NW_001092530 | TGT | 4 | 53978 | 53989 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85105440 |