List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092516 | CGC | 4 | 3154 | 3165 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85104692 |
| 2. | NW_001092516 | TCA | 4 | 4604 | 4615 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85104692 |
| 3. | NW_001092516 | CAG | 4 | 5817 | 5828 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85104692 |
| 4. | NW_001092516 | GCA | 9 | 7033 | 7059 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 5. | NW_001092516 | GCG | 4 | 7057 | 7068 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 6. | NW_001092516 | AGT | 4 | 9783 | 9794 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85104699 |
| 7. | NW_001092516 | GTC | 4 | 14482 | 14492 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85104705 |
| 8. | NW_001092516 | TCT | 6 | 16889 | 16906 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 9. | NW_001092516 | CCA | 4 | 17410 | 17421 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85104709 |
| 10. | NW_001092516 | TCA | 5 | 17590 | 17604 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85104709 |
| 11. | NW_001092516 | GCT | 4 | 18056 | 18067 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85104709 |
| 12. | NW_001092516 | TGC | 5 | 18079 | 18093 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85104709 |
| 13. | NW_001092516 | TGG | 9 | 18327 | 18353 | 27 | 0.00% | 33.33% | 66.67% | 0.00% | 85104709 |
| 14. | NW_001092516 | CTG | 7 | 19303 | 19323 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85104709 |
| 15. | NW_001092516 | GGC | 5 | 19464 | 19478 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85104709 |
| 16. | NW_001092516 | TAC | 4 | 19788 | 19799 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85104709 |
| 17. | NW_001092516 | TTC | 4 | 19797 | 19808 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85104709 |
| 18. | NW_001092516 | TGG | 4 | 20163 | 20174 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 19. | NW_001092516 | ACA | 6 | 20512 | 20529 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 20. | NW_001092516 | CTA | 4 | 21088 | 21098 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092516 | CAC | 4 | 24380 | 24392 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 22. | NW_001092516 | AGG | 4 | 24518 | 24530 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 23. | NW_001092516 | CTC | 7 | 24813 | 24833 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 24. | NW_001092516 | CTT | 4 | 28406 | 28417 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85104716 |
| 25. | NW_001092516 | GTC | 4 | 28485 | 28496 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85104716 |
| 26. | NW_001092516 | CAC | 4 | 28554 | 28565 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85104716 |
| 27. | NW_001092516 | TCA | 4 | 28675 | 28686 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85104716 |
| 28. | NW_001092516 | AGG | 4 | 28860 | 28871 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85104716 |
| 29. | NW_001092516 | TGG | 5 | 28869 | 28883 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85104716 |
| 30. | NW_001092516 | ATG | 6 | 28903 | 28920 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | 85104716 |
| 31. | NW_001092516 | AAC | 4 | 29286 | 29297 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |