List of Imperfect Tri -nucleotide repeats in Neurospora crassa OR74A

S. No. Genome ID Motif Iterations SSR Start SSR End Tract Length A% T% G% C% Protein ID
1.NW_001092490CTA41611721233.33%33.33%0.00%33.33%Non-Coding
2.NW_001092490TAA58508641566.67%33.33%0.00%0.00%Non-Coding
3.NW_001092490TAA4217921891166.67%33.33%0.00%0.00%Non-Coding
4.NW_001092490ATA5247524891566.67%33.33%0.00%0.00%Non-Coding
5.NW_001092490CAA4472347341266.67%0.00%0.00%33.33%85103879
6.NW_001092490ACC4474047511233.33%0.00%0.00%66.67%85103879
7.NW_001092490CTC677217741210.00%33.33%0.00%66.67%85103883
8.NW_001092490CCT477657776120.00%33.33%0.00%66.67%85103883
9.NW_001092490GAT4797979901233.33%33.33%33.33%0.00%85103883
10.NW_001092490TGA8809281152433.33%33.33%33.33%0.00%85103883
11.NW_001092490CTC483038314120.00%33.33%0.00%66.67%85103883
12.NW_001092490GTC483288339120.00%33.33%33.33%33.33%85103883
13.NW_001092490TCA518623186371533.33%33.33%0.00%33.33%Non-Coding
14.NW_001092490TCA420424204351233.33%33.33%0.00%33.33%Non-Coding
15.NW_001092490ACA421836218481366.67%0.00%0.00%33.33%Non-Coding
16.NW_001092490TCT42664726658120.00%66.67%0.00%33.33%85103897
17.NW_001092490ACC427262272731233.33%0.00%0.00%66.67%Non-Coding
18.NW_001092490GGC42765527666120.00%0.00%66.67%33.33%85103901
19.NW_001092490ACC531072310861533.33%0.00%0.00%66.67%Non-Coding
20.NW_001092490CAC731209312292133.33%0.00%0.00%66.67%Non-Coding
21.NW_001092490GGC43298832999120.00%0.00%66.67%33.33%85103909
22.NW_001092490TCC43495734968120.00%33.33%0.00%66.67%85103909
23.NW_001092490TCC43545835469120.00%33.33%0.00%66.67%85103913
24.NW_001092490TCC43562735641150.00%33.33%0.00%66.67%85103913
25.NW_001092490TCA435955359661233.33%33.33%0.00%33.33%85103913
26.NW_001092490TGT43614436155120.00%66.67%33.33%0.00%85103913
27.NW_001092490GTT43628636297120.00%66.67%33.33%0.00%85103913
28.NW_001092490CGA438419384321433.33%0.00%33.33%33.33%Non-Coding
29.NW_001092490ACG440243402541233.33%0.00%33.33%33.33%85103917
30.NW_001092490GTT64236942386180.00%66.67%33.33%0.00%85103920
31.NW_001092490CGA442387423981233.33%0.00%33.33%33.33%85103920
32.NW_001092490TGG94265042676270.00%33.33%66.67%0.00%85103920
33.NW_001092490GCG54284242855140.00%0.00%66.67%33.33%Non-Coding
34.NW_001092490CAC443153431641233.33%0.00%0.00%66.67%Non-Coding
35.NW_001092490GCT44316943180120.00%33.33%33.33%33.33%Non-Coding
36.NW_001092490TCT44767347684120.00%66.67%0.00%33.33%85103928
37.NW_001092490GAA449273492841266.67%0.00%33.33%0.00%85103928
38.NW_001092490GAG449667496781233.33%0.00%66.67%0.00%85103928
39.NW_001092490CCT45049950509110.00%33.33%0.00%66.67%85103932
40.NW_001092490CGC45308053090110.00%0.00%33.33%66.67%85103935
41.NW_001092490GCT45313653147120.00%33.33%33.33%33.33%85103935
42.NW_001092490GAG453309533201233.33%0.00%66.67%0.00%85103935
43.NW_001092490TCC45513855149120.00%33.33%0.00%66.67%85103938
44.NW_001092490CAT459960599711233.33%33.33%0.00%33.33%85103941
45.NW_001092490GAA462280622901166.67%0.00%33.33%0.00%Non-Coding
46.NW_001092490TCA462421624321233.33%33.33%0.00%33.33%Non-Coding
47.NW_001092490TTC46345863469120.00%66.67%0.00%33.33%85103944
48.NW_001092490GGA464041640551533.33%0.00%66.67%0.00%85103944
49.NW_001092490GAG465340653511233.33%0.00%66.67%0.00%Non-Coding
50.NW_001092490AAC465638656491266.67%0.00%0.00%33.33%Non-Coding
51.NW_001092490CTC46712567136120.00%33.33%0.00%66.67%Non-Coding
52.NW_001092490CGC47022170232120.00%0.00%33.33%66.67%85103951
53.NW_001092490ACG470352703631233.33%0.00%33.33%33.33%85103951
54.NW_001092490AGG570775707891533.33%0.00%66.67%0.00%85103951
55.NW_001092490GAG470852708651433.33%0.00%66.67%0.00%85103951
56.NW_001092490ACG471434714451233.33%0.00%33.33%33.33%85103955
57.NW_001092490CTT47173171742120.00%66.67%0.00%33.33%85103955
58.NW_001092490TTG47244872459120.00%66.67%33.33%0.00%Non-Coding
59.NW_001092490CCA476383763931133.33%0.00%0.00%66.67%85103962
60.NW_001092490TAG477208772191233.33%33.33%33.33%0.00%Non-Coding
61.NW_001092490TCT47766177671110.00%66.67%0.00%33.33%Non-Coding
62.NW_001092490CCA477757777681233.33%0.00%0.00%66.67%85103969
63.NW_001092490GCG47819578206120.00%0.00%66.67%33.33%85103969
64.NW_001092490GTG47877878789120.00%33.33%66.67%0.00%85103969
65.NW_001092490GGT57909179104140.00%33.33%66.67%0.00%Non-Coding
66.NW_001092490GAG679131791471733.33%0.00%66.67%0.00%Non-Coding
67.NW_001092490CTT47973379744120.00%66.67%0.00%33.33%Non-Coding
68.NW_001092490GGA979912799382733.33%0.00%66.67%0.00%85103972
69.NW_001092490GAG480263802741233.33%0.00%66.67%0.00%85103972
70.NW_001092490CGA480409804201233.33%0.00%33.33%33.33%85103972
71.NW_001092490ACG481229812401233.33%0.00%33.33%33.33%85103972
72.NW_001092490AGA481361813721266.67%0.00%33.33%0.00%85103972
73.NW_001092490AGG485181851921233.33%0.00%66.67%0.00%85103980
74.NW_001092490TTC48724487255120.00%66.67%0.00%33.33%85103984
75.NW_001092490AGG488630886411233.33%0.00%66.67%0.00%85103987
76.NW_001092490TGT58881488828150.00%66.67%33.33%0.00%Non-Coding
77.NW_001092490TCG58883188845150.00%33.33%33.33%33.33%Non-Coding
78.NW_001092490GGC69069990716180.00%0.00%66.67%33.33%85103990
79.NW_001092490CGA590923909371533.33%0.00%33.33%33.33%85103990
80.NW_001092490AGA591172911861566.67%0.00%33.33%0.00%85103990
81.NW_001092490AGC491376913871233.33%0.00%33.33%33.33%85103990
82.NW_001092490TCA791823918432133.33%33.33%0.00%33.33%85103994
83.NW_001092490GTA493462934721133.33%33.33%33.33%0.00%85103998
84.NW_001092490GAT493729937401233.33%33.33%33.33%0.00%85103998
85.NW_001092490AGG894602946252433.33%0.00%66.67%0.00%Non-Coding
86.NW_001092490GAG495123951341233.33%0.00%66.67%0.00%Non-Coding
87.NW_001092490GTG59676996784160.00%33.33%66.67%0.00%Non-Coding
88.NW_001092490CCA497694977061333.33%0.00%0.00%66.67%Non-Coding
89.NW_001092490GAT497792978031233.33%33.33%33.33%0.00%85104010
90.NW_001092490TCA798524985442133.33%33.33%0.00%33.33%85104010
91.NW_001092490AGC81005451005682433.33%0.00%33.33%33.33%Non-Coding
92.NW_001092490AGG41007801007911233.33%0.00%66.67%0.00%85104014
93.NW_001092490CAA41020891021011366.67%0.00%0.00%33.33%85104014
94.NW_001092490GGC4102242102256150.00%0.00%66.67%33.33%85104014
95.NW_001092490CTC6102945102962180.00%33.33%0.00%66.67%85104014
96.NW_001092490CAC41029681029791233.33%0.00%0.00%66.67%85104014
97.NW_001092490TCT6103004103021180.00%66.67%0.00%33.33%85104014
98.NW_001092490CTC4103051103061110.00%33.33%0.00%66.67%85104014
99.NW_001092490GGC4103091103102120.00%0.00%66.67%33.33%85104014
100.NW_001092490GGA51031271031411533.33%0.00%66.67%0.00%85104014
101.NW_001092490CGA41073181073281133.33%0.00%33.33%33.33%85104026
102.NW_001092490CGA41074801074911233.33%0.00%33.33%33.33%85104026
103.NW_001092490CGT4108924108935120.00%33.33%33.33%33.33%85104026
104.NW_001092490TCT4109664109675120.00%66.67%0.00%33.33%85104026
105.NW_001092490CTT4115753115764120.00%66.67%0.00%33.33%85104039
106.NW_001092490GAT41162391162491133.33%33.33%33.33%0.00%85104039
107.NW_001092490CGG4118516118527120.00%0.00%66.67%33.33%85104039
108.NW_001092490TGA41216651216761233.33%33.33%33.33%0.00%85104047
109.NW_001092490CCA41229831229941233.33%0.00%0.00%66.67%85104051
110.NW_001092490GAA41246761246871266.67%0.00%33.33%0.00%Non-Coding
111.NW_001092490AGG41279731279841233.33%0.00%66.67%0.00%85104058
112.NW_001092490GGC4128750128762130.00%0.00%66.67%33.33%85104058
113.NW_001092490CGT4132943132954120.00%33.33%33.33%33.33%85104062
114.NW_001092490TCT4133230133241120.00%66.67%0.00%33.33%85104062
115.NW_001092490GTA41349331349441233.33%33.33%33.33%0.00%85104066
116.NW_001092490GTG4135792135802110.00%33.33%66.67%0.00%85104066
117.NW_001092490CAC41367751367851133.33%0.00%0.00%66.67%Non-Coding
118.NW_001092490CGA41379631379731133.33%0.00%33.33%33.33%85104070
119.NW_001092490AAG41381591381701266.67%0.00%33.33%0.00%85104070
120.NW_001092490CGA51384461384601533.33%0.00%33.33%33.33%85104070
121.NW_001092490GAG41401171401271133.33%0.00%66.67%0.00%85104070
122.NW_001092490TGG4142432142442110.00%33.33%66.67%0.00%85104074
123.NW_001092490ATC51434881435021533.33%33.33%0.00%33.33%85104078
124.NW_001092490ACC81442741442972433.33%0.00%0.00%66.67%85104078
125.NW_001092490CCG6144422144439180.00%0.00%33.33%66.67%85104078
126.NW_001092490GGT5144739144753150.00%33.33%66.67%0.00%Non-Coding
127.NW_001092490GCC4146927146938120.00%0.00%33.33%66.67%85104082
128.NW_001092490GGT4147888147899120.00%33.33%66.67%0.00%85104086
129.NW_001092490GAA41514441514561366.67%0.00%33.33%0.00%85104094
130.NW_001092490GCT4153151153161110.00%33.33%33.33%33.33%85104094
131.NW_001092490CTT4153250153261120.00%66.67%0.00%33.33%85104094
132.NW_001092490GCC4153409153420120.00%0.00%33.33%66.67%85104094
133.NW_001092490TCT4154211154222120.00%66.67%0.00%33.33%85104097
134.NW_001092490CAT41542951543061233.33%33.33%0.00%33.33%85104097
135.NW_001092490CTC8154481154503230.00%33.33%0.00%66.67%85104097
136.NW_001092490GAG41547711547851533.33%0.00%66.67%0.00%85104097
137.NW_001092490CAC41570691570801233.33%0.00%0.00%66.67%Non-Coding
138.NW_001092490TGC4163622163633120.00%33.33%33.33%33.33%85104107
139.NW_001092490GTC4163717163728120.00%33.33%33.33%33.33%85104107
140.NW_001092490AGA41673831673941266.67%0.00%33.33%0.00%85104111
141.NW_001092490GGA81697511697742433.33%0.00%66.67%0.00%85104114
142.NW_001092490AAC41703991704091166.67%0.00%0.00%33.33%Non-Coding
143.NW_001092490AAT41713721713831266.67%33.33%0.00%0.00%Non-Coding
144.NW_001092490ACC41720381720501333.33%0.00%0.00%66.67%Non-Coding
145.NW_001092490CTT4172264172275120.00%66.67%0.00%33.33%85104118
146.NW_001092490TCC6173535173552180.00%33.33%0.00%66.67%85104122
147.NW_001092490CAA41750691750801266.67%0.00%0.00%33.33%Non-Coding
148.NW_001092490AAC41785301785411266.67%0.00%0.00%33.33%Non-Coding
149.NW_001092490CCA41787131787241233.33%0.00%0.00%66.67%Non-Coding
150.NW_001092490CCA51793451793591533.33%0.00%0.00%66.67%Non-Coding
151.NW_001092490CTC4179456179466110.00%33.33%0.00%66.67%85104130
152.NW_001092490ATG51799651799791533.33%33.33%33.33%0.00%85104130
153.NW_001092490TTG4181457181468120.00%66.67%33.33%0.00%Non-Coding
154.NW_001092490CGG4181518181529120.00%0.00%66.67%33.33%Non-Coding
155.NW_001092490TCA41828941829041133.33%33.33%0.00%33.33%85104134
156.NW_001092490TCA41842331842431133.33%33.33%0.00%33.33%Non-Coding
157.NW_001092490TGG4184427184438120.00%33.33%66.67%0.00%85104138
158.NW_001092490GTA41914381914481133.33%33.33%33.33%0.00%85104142
159.NW_001092490TTG9193753193779270.00%66.67%33.33%0.00%Non-Coding
160.NW_001092490ACA51940611940741466.67%0.00%0.00%33.33%Non-Coding
161.NW_001092490TCT4194997195008120.00%66.67%0.00%33.33%85104146
162.NW_001092490GGA41972191972301233.33%0.00%66.67%0.00%85104150
163.NW_001092490AAG42010392010491166.67%0.00%33.33%0.00%Non-Coding
164.NW_001092490TCA42035732035841233.33%33.33%0.00%33.33%85104154
165.NW_001092490AGG42065392065501233.33%0.00%66.67%0.00%85104161
166.NW_001092490TGG4206693206705130.00%33.33%66.67%0.00%85104161
167.NW_001092490TCA42116162116271233.33%33.33%0.00%33.33%Non-Coding
168.NW_001092490ACA62144442144642166.67%0.00%0.00%33.33%85104173
169.NW_001092490TCC5220493220507150.00%33.33%0.00%66.67%Non-Coding
170.NW_001092490CAC42205482205591233.33%0.00%0.00%66.67%85104184
171.NW_001092490GGT8220719220742240.00%33.33%66.67%0.00%85104184
172.NW_001092490CAA42246652246761266.67%0.00%0.00%33.33%Non-Coding
173.NW_001092490ACC42248752248861233.33%0.00%0.00%66.67%Non-Coding
174.NW_001092490CAT42261932262031133.33%33.33%0.00%33.33%85104196
175.NW_001092490CAT42263972264071133.33%33.33%0.00%33.33%85104196
176.NW_001092490GAG72267742267942133.33%0.00%66.67%0.00%85104196
177.NW_001092490GTG4226892226903120.00%33.33%66.67%0.00%85104196
178.NW_001092490GAT42280572280671133.33%33.33%33.33%0.00%Non-Coding
179.NW_001092490TCA42284942285061333.33%33.33%0.00%33.33%85104200
180.NW_001092490TCG5228512228526150.00%33.33%33.33%33.33%85104200
181.NW_001092490GGA42305552305651133.33%0.00%66.67%0.00%Non-Coding
182.NW_001092490CGA42327122327221133.33%0.00%33.33%33.33%Non-Coding
183.NW_001092490GGT4232806232817120.00%33.33%66.67%0.00%Non-Coding
184.NW_001092490GTC5232962232976150.00%33.33%33.33%33.33%Non-Coding
185.NW_001092490CAG42335132335231133.33%0.00%33.33%33.33%Non-Coding
186.NW_001092490TGA42335492335601233.33%33.33%33.33%0.00%Non-Coding
187.NW_001092490CTC4233661233672120.00%33.33%0.00%66.67%85104208
188.NW_001092490ATC42338092338201233.33%33.33%0.00%33.33%85104208
189.NW_001092490GAA42397312397421266.67%0.00%33.33%0.00%85104216
190.NW_001092490AAC42411972412081266.67%0.00%0.00%33.33%85104216
191.NW_001092490ATG42453322453421133.33%33.33%33.33%0.00%Non-Coding
192.NW_001092490GCC4246725246736120.00%0.00%33.33%66.67%Non-Coding
193.NW_001092490AGA42494132494241266.67%0.00%33.33%0.00%Non-Coding
194.NW_001092490AGA42515692515801266.67%0.00%33.33%0.00%85104226
195.NW_001092490GCA52515882516011433.33%0.00%33.33%33.33%85104226
196.NW_001092490CTG4252061252072120.00%33.33%33.33%33.33%85104226
197.NW_001092490AGG42521182521291233.33%0.00%66.67%0.00%85104226
198.NW_001092490CAA42521502521611266.67%0.00%0.00%33.33%85104226
199.NW_001092490TGG4252335252346120.00%33.33%66.67%0.00%85104226
200.NW_001092490TGG4252374252385120.00%33.33%66.67%0.00%85104226
201.NW_001092490GGT5253079253093150.00%33.33%66.67%0.00%85104226
202.NW_001092490GTT4253118253128110.00%66.67%33.33%0.00%Non-Coding
203.NW_001092490GAT52531292531421433.33%33.33%33.33%0.00%Non-Coding
204.NW_001092490CCA42547152547251133.33%0.00%0.00%66.67%85104230
205.NW_001092490GGA42591922592031233.33%0.00%66.67%0.00%85104233
206.NW_001092490TAC42602342602451233.33%33.33%0.00%33.33%85104233
207.NW_001092490TCT5261545261559150.00%66.67%0.00%33.33%Non-Coding
208.NW_001092490CCT4262851262862120.00%33.33%0.00%66.67%85104237
209.NW_001092490CAG42639332639431133.33%0.00%33.33%33.33%85104237
210.NW_001092490AGA42654792654901266.67%0.00%33.33%0.00%Non-Coding
211.NW_001092490TTC4266123266133110.00%66.67%0.00%33.33%Non-Coding
212.NW_001092490CTC4266358266369120.00%33.33%0.00%66.67%85104240
213.NW_001092490TGT4268756268768130.00%66.67%33.33%0.00%Non-Coding
214.NW_001092490TCC4270727270738120.00%33.33%0.00%66.67%Non-Coding
215.NW_001092490ACA42724412724521266.67%0.00%0.00%33.33%85104247
216.NW_001092490AAC42726112726221266.67%0.00%0.00%33.33%85104247
217.NW_001092490CAA42731982732091266.67%0.00%0.00%33.33%85104247
218.NW_001092490TAT52747462747601533.33%66.67%0.00%0.00%Non-Coding
219.NW_001092490CGC4275222275233120.00%0.00%33.33%66.67%85104250
220.NW_001092490CGG4275678275689120.00%0.00%66.67%33.33%85104250
221.NW_001092490TGG4276115276126120.00%33.33%66.67%0.00%85104250
222.NW_001092490GCT4277368277379120.00%33.33%33.33%33.33%85104250
223.NW_001092490TGT4277677277687110.00%66.67%33.33%0.00%Non-Coding
224.NW_001092490CCG4283114283125120.00%0.00%33.33%66.67%Non-Coding
225.NW_001092490GCG4286194286205120.00%0.00%66.67%33.33%Non-Coding
226.NW_001092490GCG4287280287290110.00%0.00%66.67%33.33%85104261
227.NW_001092490ACA72878482878682166.67%0.00%0.00%33.33%85104261
228.NW_001092490CAC42927842927941133.33%0.00%0.00%66.67%Non-Coding
229.NW_001092490CCA42932412932521233.33%0.00%0.00%66.67%Non-Coding
230.NW_001092490CGG8293940293963240.00%0.00%66.67%33.33%85104264
231.NW_001092490GGC4294552294563120.00%0.00%66.67%33.33%85104264
232.NW_001092490CAG42952202952301133.33%0.00%33.33%33.33%85104267
233.NW_001092490GCA52955252955391533.33%0.00%33.33%33.33%85104267
234.NW_001092490GCC4296995297005110.00%0.00%33.33%66.67%Non-Coding
235.NW_001092490CAA42978662978761166.67%0.00%0.00%33.33%Non-Coding
236.NW_001092490GCC5299071299085150.00%0.00%33.33%66.67%85104274
237.NW_001092490CTG4299096299107120.00%33.33%33.33%33.33%85104274
238.NW_001092490GAA43001623001731266.67%0.00%33.33%0.00%85104274
239.NW_001092490ACA43001763001871266.67%0.00%0.00%33.33%85104274
240.NW_001092490CCA43027483027591233.33%0.00%0.00%66.67%85104281
241.NW_001092490ACC43028553028661233.33%0.00%0.00%66.67%85104281
242.NW_001092490CAG43044203044311233.33%0.00%33.33%33.33%85104281
243.NW_001092490GTG4304978304988110.00%33.33%66.67%0.00%85104281
244.NW_001092490TGA43069693069791133.33%33.33%33.33%0.00%85104285
245.NW_001092490GAT43103033103141233.33%33.33%33.33%0.00%85104285
246.NW_001092490GAT53110833110971533.33%33.33%33.33%0.00%85104285
247.NW_001092490GAG113110923111243333.33%0.00%66.67%0.00%85104285
248.NW_001092490AGG43132303132411233.33%0.00%66.67%0.00%Non-Coding
249.NW_001092490CGG4313435313446120.00%0.00%66.67%33.33%85104289
250.NW_001092490CCA43146723146831233.33%0.00%0.00%66.67%85104289
251.NW_001092490ACA53161413161561666.67%0.00%0.00%33.33%Non-Coding
252.NW_001092490CGT4317710317720110.00%33.33%33.33%33.33%Non-Coding
253.NW_001092490GGT4318372318383120.00%33.33%66.67%0.00%Non-Coding
254.NW_001092490TAC43190843190941133.33%33.33%0.00%33.33%Non-Coding
255.NW_001092490GCG4322049322059110.00%0.00%66.67%33.33%85104307