List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092467 | CAG | 17 | 4297 | 4348 | 52 | 33.33% | 0.00% | 33.33% | 33.33% | 85099500 |
| 2. | NW_001092467 | CAA | 5 | 4357 | 4371 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85099500 |
| 3. | NW_001092467 | CGG | 4 | 4709 | 4720 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85099500 |
| 4. | NW_001092467 | ACG | 4 | 6236 | 6247 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 5. | NW_001092467 | ACC | 7 | 8287 | 8307 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85099508 |
| 6. | NW_001092467 | ACA | 4 | 8340 | 8351 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85099508 |
| 7. | NW_001092467 | AGA | 4 | 8683 | 8694 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85099508 |
| 8. | NW_001092467 | AGG | 9 | 8692 | 8718 | 27 | 33.33% | 0.00% | 66.67% | 0.00% | 85099508 |
| 9. | NW_001092467 | GAG | 5 | 8736 | 8750 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85099508 |
| 10. | NW_001092467 | AGG | 4 | 8989 | 9000 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85099508 |
| 11. | NW_001092467 | GAC | 4 | 9021 | 9032 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85099508 |
| 12. | NW_001092467 | GAG | 4 | 9063 | 9074 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85099508 |
| 13. | NW_001092467 | AAG | 5 | 9072 | 9086 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85099508 |
| 14. | NW_001092467 | AGA | 4 | 9118 | 9129 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85099508 |
| 15. | NW_001092467 | AAG | 4 | 9688 | 9698 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 16. | NW_001092467 | ATC | 4 | 10617 | 10627 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092467 | TCT | 5 | 12107 | 12121 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092467 | TCT | 4 | 12133 | 12144 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001092467 | GGA | 4 | 13422 | 13433 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85099515 |
| 20. | NW_001092467 | TGG | 4 | 14165 | 14176 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85099515 |
| 21. | NW_001092467 | CTC | 5 | 15297 | 15311 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85099519 |
| 22. | NW_001092467 | CGT | 4 | 16306 | 16317 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 23. | NW_001092467 | GAC | 4 | 17105 | 17116 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85099523 |
| 24. | NW_001092467 | CCA | 4 | 17403 | 17415 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85099523 |
| 25. | NW_001092467 | ATG | 4 | 18487 | 18498 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85099523 |
| 26. | NW_001092467 | ATG | 4 | 19170 | 19180 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092467 | TTG | 4 | 20107 | 20118 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85099527 |
| 28. | NW_001092467 | GCT | 12 | 21463 | 21498 | 36 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 29. | NW_001092467 | GTG | 4 | 21596 | 21606 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 30. | NW_001092467 | GAG | 4 | 21778 | 21788 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 31. | NW_001092467 | CAA | 10 | 23487 | 23517 | 31 | 66.67% | 0.00% | 0.00% | 33.33% | 85099531 |
| 32. | NW_001092467 | GAC | 4 | 26796 | 26807 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092467 | TCT | 4 | 27993 | 28007 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85099535 |
| 34. | NW_001092467 | TCT | 4 | 28037 | 28048 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85099535 |
| 35. | NW_001092467 | GTG | 4 | 28500 | 28511 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85099535 |
| 36. | NW_001092467 | GTG | 4 | 29380 | 29391 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 37. | NW_001092467 | CGA | 12 | 30660 | 30694 | 35 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 38. | NW_001092467 | CTG | 4 | 30751 | 30762 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 39. | NW_001092467 | TCC | 4 | 31139 | 31150 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85099539 |
| 40. | NW_001092467 | TTG | 4 | 34385 | 34395 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092467 | GAC | 4 | 36128 | 36138 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 42. | NW_001092467 | CAG | 4 | 37469 | 37480 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85099548 |
| 43. | NW_001092467 | CAG | 5 | 38714 | 38728 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85099548 |
| 44. | NW_001092467 | CTC | 5 | 40846 | 40860 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 45. | NW_001092467 | TCG | 4 | 40859 | 40870 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 46. | NW_001092467 | CCT | 4 | 41874 | 41885 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85099552 |
| 47. | NW_001092467 | CGT | 4 | 42282 | 42293 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85099552 |
| 48. | NW_001092467 | GTG | 5 | 42432 | 42446 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85099552 |
| 49. | NW_001092467 | GTT | 4 | 42536 | 42547 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85099552 |
| 50. | NW_001092467 | GTG | 4 | 42565 | 42575 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85099552 |
| 51. | NW_001092467 | TTC | 4 | 42883 | 42897 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85099552 |
| 52. | NW_001092467 | TCG | 4 | 42949 | 42960 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85099552 |
| 53. | NW_001092467 | TGA | 4 | 44428 | 44439 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85099556 |
| 54. | NW_001092467 | CAC | 4 | 45472 | 45483 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 55. | NW_001092467 | CAC | 5 | 45533 | 45547 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 56. | NW_001092467 | CTG | 4 | 46488 | 46499 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 57. | NW_001092467 | GAA | 7 | 46529 | 46549 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 58. | NW_001092467 | TCC | 4 | 47181 | 47192 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85099564 |
| 59. | NW_001092467 | GTG | 6 | 51829 | 51846 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 60. | NW_001092467 | GGC | 4 | 52377 | 52388 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85099572 |
| 61. | NW_001092467 | AGA | 4 | 52695 | 52706 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85099572 |
| 62. | NW_001092467 | CAC | 4 | 53013 | 53025 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85099572 |
| 63. | NW_001092467 | CAC | 4 | 53378 | 53389 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |