List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092464 | AAT | 4 | 384 | 396 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092464 | CTA | 4 | 1247 | 1258 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092464 | TAA | 4 | 1359 | 1369 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092464 | TTA | 4 | 1389 | 1400 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092464 | GAA | 4 | 1453 | 1464 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 6. | NW_001092464 | GAG | 4 | 1826 | 1837 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 7. | NW_001092464 | ATA | 4 | 2056 | 2066 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092464 | AAT | 4 | 2222 | 2233 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092464 | GAA | 4 | 2261 | 2271 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092464 | ATA | 4 | 3116 | 3126 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092464 | ATT | 5 | 3700 | 3714 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092464 | ATA | 4 | 3752 | 3763 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 13. | NW_001092464 | ATA | 4 | 4025 | 4037 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092464 | TAA | 5 | 4479 | 4492 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092464 | GTA | 4 | 4985 | 4997 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | 85074579 |
| 16. | NW_001092464 | TTA | 4 | 8039 | 8049 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 17. | NW_001092464 | AAT | 4 | 9736 | 9747 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092464 | TTA | 4 | 9760 | 9771 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092464 | TAT | 4 | 10019 | 10030 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092464 | ATA | 4 | 10210 | 10221 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001092464 | TAA | 5 | 10273 | 10288 | 16 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092464 | ATT | 4 | 11324 | 11335 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 23. | NW_001092464 | CTA | 4 | 11418 | 11428 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 24. | NW_001092464 | TCT | 4 | 11461 | 11472 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092464 | AGT | 4 | 11507 | 11517 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092464 | ATT | 5 | 11537 | 11551 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092464 | ACA | 4 | 15693 | 15703 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092464 | ACA | 4 | 19296 | 19307 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85074587 |
| 29. | NW_001092464 | GAG | 12 | 21581 | 21616 | 36 | 33.33% | 0.00% | 66.67% | 0.00% | 85074587 |
| 30. | NW_001092464 | GAC | 14 | 24333 | 24374 | 42 | 33.33% | 0.00% | 33.33% | 33.33% | 85074591 |
| 31. | NW_001092464 | GAC | 4 | 25488 | 25498 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 32. | NW_001092464 | AGA | 4 | 26682 | 26693 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092464 | CGG | 4 | 29682 | 29693 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 34. | NW_001092464 | CAC | 5 | 31676 | 31690 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 35. | NW_001092464 | AGA | 4 | 31972 | 31983 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85074599 |
| 36. | NW_001092464 | CAT | 4 | 32139 | 32150 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85074599 |
| 37. | NW_001092464 | CAC | 4 | 32501 | 32513 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85074599 |
| 38. | NW_001092464 | AAC | 4 | 33707 | 33718 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092464 | CTC | 4 | 33842 | 33853 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85074601 |
| 40. | NW_001092464 | TCT | 4 | 34047 | 34058 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85074601 |
| 41. | NW_001092464 | GAA | 4 | 37592 | 37602 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092464 | CAT | 4 | 37771 | 37781 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001092464 | ATC | 4 | 37789 | 37800 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092464 | CTT | 4 | 38794 | 38805 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 45. | NW_001092464 | GAT | 4 | 39793 | 39804 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85074603 |
| 46. | NW_001092464 | TCG | 4 | 42497 | 42508 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 47. | NW_001092464 | CAG | 4 | 45261 | 45271 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85074607 |
| 48. | NW_001092464 | CAC | 4 | 45312 | 45323 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85074607 |
| 49. | NW_001092464 | CTG | 4 | 45624 | 45634 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85074607 |
| 50. | NW_001092464 | GCC | 4 | 45811 | 45822 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85074607 |
| 51. | NW_001092464 | ACC | 4 | 46910 | 46921 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85074609 |
| 52. | NW_001092464 | CAG | 4 | 46990 | 47001 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85074609 |
| 53. | NW_001092464 | CCG | 4 | 46999 | 47010 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85074609 |
| 54. | NW_001092464 | TTG | 5 | 47294 | 47308 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85074609 |
| 55. | NW_001092464 | GTT | 4 | 48601 | 48612 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85074609 |