List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092463 | AGC | 4 | 94 | 105 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 2. | NW_001092463 | TAT | 4 | 520 | 530 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092463 | CTA | 4 | 533 | 544 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 4. | NW_001092463 | ATT | 4 | 865 | 877 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092463 | TAA | 5 | 906 | 921 | 16 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092463 | TAC | 4 | 2896 | 2906 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 7. | NW_001092463 | CCT | 4 | 3402 | 3413 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 8. | NW_001092463 | CGG | 4 | 3960 | 3971 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 9. | NW_001092463 | AAG | 4 | 5374 | 5385 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85099279 |
| 10. | NW_001092463 | CGG | 4 | 6757 | 6767 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85099279 |
| 11. | NW_001092463 | ACT | 4 | 8942 | 8953 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 12. | NW_001092463 | GAA | 7 | 9570 | 9588 | 19 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092463 | TCG | 4 | 10169 | 10180 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85099282 |
| 14. | NW_001092463 | CTT | 4 | 12826 | 12836 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001092463 | CAT | 7 | 13527 | 13547 | 21 | 33.33% | 33.33% | 0.00% | 33.33% | 85099285 |
| 16. | NW_001092463 | CGA | 4 | 14327 | 14338 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85099285 |
| 17. | NW_001092463 | AGA | 4 | 14958 | 14969 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092463 | ACC | 4 | 15316 | 15327 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 19. | NW_001092463 | AGT | 4 | 18104 | 18115 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85099289 |
| 20. | NW_001092463 | CGG | 4 | 19295 | 19306 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 21. | NW_001092463 | TGG | 4 | 19392 | 19402 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 22. | NW_001092463 | GTT | 5 | 20676 | 20690 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 23. | NW_001092463 | CAC | 4 | 22146 | 22156 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85099293 |
| 24. | NW_001092463 | TGC | 4 | 23057 | 23068 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85099293 |
| 25. | NW_001092463 | GTT | 7 | 23412 | 23432 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85099293 |
| 26. | NW_001092463 | GAC | 4 | 27093 | 27104 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 27. | NW_001092463 | GGA | 4 | 27689 | 27699 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092463 | GCT | 4 | 28017 | 28027 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 29. | NW_001092463 | GAC | 5 | 28480 | 28494 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 30. | NW_001092463 | GAC | 5 | 34595 | 34609 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85099306 |
| 31. | NW_001092463 | GAA | 4 | 35964 | 35974 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85099306 |
| 32. | NW_001092463 | GCA | 4 | 36574 | 36585 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85099306 |
| 33. | NW_001092463 | CGA | 4 | 37367 | 37378 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 34. | NW_001092463 | CGC | 4 | 38116 | 38127 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85099310 |
| 35. | NW_001092463 | GGA | 7 | 38345 | 38365 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85099310 |
| 36. | NW_001092463 | ACA | 4 | 38671 | 38682 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85099310 |
| 37. | NW_001092463 | ATC | 4 | 42319 | 42330 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092463 | CAC | 4 | 45264 | 45275 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85099323 |
| 39. | NW_001092463 | GTG | 5 | 46065 | 46079 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85099323 |
| 40. | NW_001092463 | TGA | 4 | 46228 | 46239 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092463 | TGG | 4 | 46831 | 46842 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 42. | NW_001092463 | TCA | 4 | 46843 | 46854 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001092463 | TCC | 5 | 46855 | 46869 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |