List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092453 | GGC | 4 | 3441 | 3453 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | 85098614 |
| 2. | NW_001092453 | AGG | 4 | 4601 | 4612 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85098618 |
| 3. | NW_001092453 | TTG | 4 | 4777 | 4789 | 13 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092453 | CCA | 4 | 7342 | 7353 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85098622 |
| 5. | NW_001092453 | GAT | 4 | 8052 | 8063 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85098622 |
| 6. | NW_001092453 | GCA | 4 | 9112 | 9122 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 7. | NW_001092453 | AGC | 4 | 9477 | 9488 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 8. | NW_001092453 | CAC | 5 | 9656 | 9669 | 14 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 9. | NW_001092453 | CAA | 4 | 10077 | 10089 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092453 | GCT | 5 | 10345 | 10358 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | 85098626 |
| 11. | NW_001092453 | TGT | 7 | 10618 | 10638 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85098626 |
| 12. | NW_001092453 | GTG | 4 | 11169 | 11180 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 13. | NW_001092453 | GTG | 4 | 12018 | 12029 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 14. | NW_001092453 | TGA | 4 | 12981 | 12992 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092453 | CAC | 5 | 13656 | 13670 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 16. | NW_001092453 | CAC | 4 | 13774 | 13785 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85098630 |
| 17. | NW_001092453 | CGC | 4 | 13878 | 13888 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85098630 |
| 18. | NW_001092453 | TCC | 7 | 13984 | 14005 | 22 | 0.00% | 33.33% | 0.00% | 66.67% | 85098630 |
| 19. | NW_001092453 | TCT | 4 | 14021 | 14031 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85098630 |
| 20. | NW_001092453 | GAG | 4 | 14315 | 14326 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85098630 |
| 21. | NW_001092453 | TCA | 4 | 15121 | 15133 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 22. | NW_001092453 | CCG | 4 | 15635 | 15647 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 23. | NW_001092453 | CCA | 12 | 16023 | 16058 | 36 | 33.33% | 0.00% | 0.00% | 66.67% | 85098633 |
| 24. | NW_001092453 | CGT | 4 | 16081 | 16092 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85098633 |
| 25. | NW_001092453 | CTG | 4 | 16434 | 16445 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85098633 |
| 26. | NW_001092453 | ACA | 7 | 16464 | 16484 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85098633 |
| 27. | NW_001092453 | TGT | 7 | 17044 | 17065 | 22 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 28. | NW_001092453 | ATA | 4 | 17880 | 17891 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092453 | TGC | 5 | 18016 | 18030 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 30. | NW_001092453 | CGA | 4 | 18063 | 18074 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 31. | NW_001092453 | ACC | 4 | 18240 | 18251 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85098637 |
| 32. | NW_001092453 | GCC | 4 | 18294 | 18305 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85098637 |
| 33. | NW_001092453 | CAC | 4 | 18920 | 18930 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85098637 |
| 34. | NW_001092453 | GAT | 4 | 19128 | 19139 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85098637 |
| 35. | NW_001092453 | GTC | 4 | 19878 | 19889 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 36. | NW_001092453 | TGG | 4 | 19946 | 19958 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 37. | NW_001092453 | GAT | 4 | 24003 | 24013 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 38. | NW_001092453 | TGA | 4 | 24854 | 24865 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092453 | ACG | 6 | 25551 | 25568 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85098641 |
| 40. | NW_001092453 | TGG | 4 | 26231 | 26243 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 41. | NW_001092453 | CAT | 4 | 27396 | 27407 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001092453 | TAT | 4 | 31302 | 31313 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001092453 | TAT | 5 | 31472 | 31485 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001092453 | ATT | 7 | 32481 | 32502 | 22 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |