List of
Perfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092433 | CGG | 4 | 1025 | 1036 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85097269 |
| 2. | NW_001092433 | CGG | 4 | 1358 | 1369 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85097269 |
| 3. | NW_001092433 | AAC | 4 | 2787 | 2798 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85097269 |
| 4. | NW_001092433 | CAC | 7 | 7084 | 7104 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 5. | NW_001092433 | CAC | 4 | 7330 | 7341 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85097273 |
| 6. | NW_001092433 | CTT | 8 | 7562 | 7585 | 24 | 0.00% | 66.67% | 0.00% | 33.33% | 85097273 |
| 7. | NW_001092433 | GCT | 4 | 7587 | 7598 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85097273 |
| 8. | NW_001092433 | GGA | 9 | 7681 | 7707 | 27 | 33.33% | 0.00% | 66.67% | 0.00% | 85097273 |
| 9. | NW_001092433 | AGG | 5 | 7848 | 7862 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85097273 |
| 10. | NW_001092433 | CTT | 4 | 9572 | 9583 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85097273 |
| 11. | NW_001092433 | AAC | 5 | 10936 | 10950 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85097277 |
| 12. | NW_001092433 | AAG | 4 | 14244 | 14255 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85097277 |
| 13. | NW_001092433 | TGC | 6 | 14366 | 14383 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85097277 |
| 14. | NW_001092433 | TGG | 5 | 16940 | 16954 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 15. | NW_001092433 | CAG | 4 | 22134 | 22145 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85097294 |
| 16. | NW_001092433 | CAA | 10 | 22258 | 22287 | 30 | 66.67% | 0.00% | 0.00% | 33.33% | 85097294 |
| 17. | NW_001092433 | GAA | 4 | 23710 | 23721 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85097294 |
| 18. | NW_001092433 | GCA | 4 | 25847 | 25858 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85097297 |
| 19. | NW_001092433 | GGC | 4 | 36938 | 36949 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85097300 |
| 20. | NW_001092433 | TGC | 5 | 36950 | 36964 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85097300 |
| 21. | NW_001092433 | GGC | 5 | 36965 | 36979 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85097300 |
| 22. | NW_001092433 | GGT | 4 | 37626 | 37637 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85097300 |
| 23. | NW_001092433 | TGG | 4 | 40629 | 40640 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85097304 |
| 24. | NW_001092433 | ACA | 5 | 41720 | 41734 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 25. | NW_001092433 | TGA | 4 | 42285 | 42296 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092433 | GCC | 5 | 43000 | 43014 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85097308 |
| 27. | NW_001092433 | GCA | 4 | 43204 | 43215 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85097308 |
| 28. | NW_001092433 | GGC | 4 | 43479 | 43490 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85097308 |
| 29. | NW_001092433 | TGT | 7 | 46087 | 46107 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | 85097312 |
| 30. | NW_001092433 | GAG | 8 | 53749 | 53772 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 31. | NW_001092433 | CAC | 10 | 71058 | 71087 | 30 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 32. | NW_001092433 | GAA | 5 | 71385 | 71399 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092433 | ACA | 12 | 83747 | 83782 | 36 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092433 | CGT | 4 | 86929 | 86940 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 35. | NW_001092433 | CAA | 4 | 87179 | 87190 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85097357 |
| 36. | NW_001092433 | TGC | 10 | 88199 | 88228 | 30 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092433 | GTT | 8 | 93849 | 93872 | 24 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 38. | NW_001092433 | TCT | 4 | 94413 | 94424 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092433 | AAC | 4 | 94542 | 94553 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001092433 | GTT | 5 | 95418 | 95432 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092433 | GTG | 4 | 99368 | 99379 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85097365 |
| 42. | NW_001092433 | GGT | 4 | 106327 | 106338 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85097373 |
| 43. | NW_001092433 | GTT | 4 | 106343 | 106354 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85097373 |
| 44. | NW_001092433 | GTT | 9 | 106382 | 106408 | 27 | 0.00% | 66.67% | 33.33% | 0.00% | 85097373 |
| 45. | NW_001092433 | CCA | 4 | 108198 | 108209 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85097377 |
| 46. | NW_001092433 | TTG | 5 | 111256 | 111270 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85097381 |
| 47. | NW_001092433 | CTC | 4 | 122487 | 122498 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 48. | NW_001092433 | CGC | 4 | 122583 | 122594 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85097397 |
| 49. | NW_001092433 | GTC | 4 | 127974 | 127985 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 50. | NW_001092433 | GTG | 6 | 134229 | 134246 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85097409 |
| 51. | NW_001092433 | TCC | 7 | 137641 | 137661 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |